DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octalpha2R and Htr5b

DIOPT Version :10

Sequence 1:NP_001262715.1 Gene:Octalpha2R / 42258 FlyBaseID:FBgn0038653 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_034613.2 Gene:Htr5b / 15564 MGIID:96284 Length:370 Species:Mus musculus


Alignment Length:325 Identity:74/325 - (22%)
Similarity:111/325 - (34%) Gaps:125/325 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 FVVSIDYRLSPETVFPENLLDCEKA-IDYFLENSLEKFKIDPKKVILVGD--SAGGNL------A 209
            |:.|.||.|:...   |.:|   || :||.:|..|          :|.||  |..|.:      .
Mouse   248 FLPSRDYYLNKTN---EKVL---KAYLDYMVELGL----------LLGGDKNSTRGQMQQILDFE 296

  Fly   210 TAIA-------QRRAEKGAEPKLLAQVLLYPLLQLVDLQMTS-----YRYFHKRLTGIAFVDPAS 262
            ||:|       :||.|:          .:|..:.:.|||:.:     ..|.:..|:.:...|...
Mouse   297 TALANITVPQDERRDEE----------KIYHKITIADLQVLAPAIEWLDYLNSVLSPLELNDTEP 351

  Fly   263 VAFYYMLYAGIPLEKAKELV----PIVLTN---------GHVKPDYR--EKIDKLLTYRTTIEST 312
            |..|...|    :::..||:    ..:|.|         |....|.|  ...||||      || 
Mouse   352 VVVYAKEY----MQQVSELINKTDHSLLNNYMIWNLVQKGASSLDQRFENAQDKLL------ES- 405

  Fly   313 HTYNTTK-IPKRWE-IVENSE------AQNLLEKVIFDPN----------FSPIMRENLENLPKS 359
             .|.|.| ...||: .:.|::      ...|..|..||..          |.|....|:.:...:
Mouse   406 -LYGTKKSCTPRWQTCIGNTDDTLGFALGALFVKATFDKQSKEIDLNGGAFLPSCGRNVNSTVHN 469

  Fly   360 LIVTCEYDVLRDEGLIYSERLMASGVPTKLINYKNGYHAMLNMHNEI-TEASTCLDDVMHWILEQ 423
            |:.:.   :.:.||:|                            ||| |.....||| :.|:.||
Mouse   470 LMFSV---ITQAEGMI----------------------------NEIRTAFKGALDD-LKWMDEQ 502

  Fly   424  423
            Mouse   503  502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octalpha2RNP_001262715.1 7tmA_alpha2_AR 132..>307 CDD:320187 45/188 (24%)
TM helix 2 150..176 CDD:320187 7/21 (33%)
TM helix 3 188..218 CDD:320187 10/44 (23%)
TM helix 4 230..253 CDD:320187 5/27 (19%)
TM helix 5 271..300 CDD:320187 7/43 (16%)
7tm_GPCRs <616..693 CDD:475119
TM helix 6 626..648 CDD:410628
TM helix 7 661..686 CDD:410628
Htr5bNP_034613.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..36
7tm_GPCRs 65..362 CDD:475119 34/143 (24%)
TM helix 2 88..110 CDD:410628
TM helix 3 128..150 CDD:410628
TM helix 4 173..189 CDD:410628
TM helix 5 211..234 CDD:410628
TM helix 6 297..319 CDD:410628 7/31 (23%)
TM helix 7 330..355 CDD:410628 4/24 (17%)
Blue background indicates that the domain is not in the aligned region.

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