DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Octalpha2R and Adra2b

DIOPT Version :9

Sequence 1:NP_001262715.1 Gene:Octalpha2R / 42258 FlyBaseID:FBgn0038653 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_033763.3 Gene:Adra2b / 11552 MGIID:87935 Length:448 Species:Mus musculus


Alignment Length:593 Identity:191/593 - (32%)
Similarity:272/593 - (45%) Gaps:180/593 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 IASIIVTILMIIIVVGNMLVIIAIATEKSLKNIQNWFIASLAVADFFLGLIIMPFSLANELMGYW 181
            |||.| |.|::..:.||.|||:|:.|.:||:..||.|:.|||.||..:..:|:||||||||:|||
Mouse    15 IASAI-TFLILFTIFGNALVILAVLTSRSLRAPQNLFLVSLAAADILVATLIIPFSLANELLGYW 78

  Fly   182 IFGSWWCDIHSAMDVLLCTASIMNLCLISLDRYWSITKAVDYLKSRTPARAAVMITAVWIMSALI 246
            .|...||:::.|:|||.||:||::||.|||||||::::|::|...|||.|...:|..||:::|:|
Mouse    79 YFWRAWCEVYLALDVLFCTSSIVHLCAISLDRYWAVSRALEYNSKRTPRRIKCIILTVWLIAAVI 143

  Fly   247 CIPPLL--GWKVKMPEGPLPKCELSEDIGYVLYSALGSFYIPSCIMVFVYIRIYFAAKARARRGI 309
            .:|||:  |.:...|.| ||:|||:::..|:|.|::|||:.|..||:.||:|||..||....||:
Mouse   144 SLPPLIYKGDQRPEPHG-LPQCELNQEAWYILASSIGSFFAPCLIMILVYLRIYVIAKRSHCRGL 207

  Fly   310 KKHPRKTNNEQVTSFTTAKKGT------IPMPSSSGVSALQLHQQRQIATIETPPNSASLPMQIP 368
                            .||:|:      .|.|::.||                 |.||    ::|
Mouse   208 ----------------GAKRGSGEGESKKPHPAAGGV-----------------PASA----KVP 235

  Fly   369 TVTMDLASDISTSEAGELEAVAAQTVLAYANPNGAGTNSVTVVSSGNGGPGASGVPPSSPKETLQ 433
            |:...|:|                                  |...||.|     .|...||..:
Mouse   236 TLVSPLSS----------------------------------VGEANGHP-----KPPREKEEGE 261

  Fly   434 VSTIATGRVGLNVPVPPSMGSNSSINVLNNNNGTVAMDGGATAAGGGNGSAVATPGGLQQTGGNE 498
            .......|.     :||:. |....:|.:...||    .||||                :.|..|
Mouse   262 TPEDPEARA-----LPPNW-SALPRSVQDQKKGT----SGATA----------------EKGAEE 300

  Fly   499 LRVSPIAGRCRALSVGVDTDMVSEFDPSSSDSGVVSRCAVVKPLKFRLCQPIFGRKSSNQQRRNE 563
                             |.:.|.|.:|.:..:   |..:|..|       |:      .|.:.:.
Mouse   301 -----------------DEEEVEECEPQTLPA---SPASVFNP-------PL------QQPQTSR 332

  Fly   564 AKAAAKNQ----QSSGVASKNQQQQQQQQQQQVVKSELEPAIPKTPKPRDPEKEKRRIARKKEKR 624
            ..|..:.|    ::.||||                               .:..:||....:|||
Mouse   333 VLATLRGQVLLSKNVGVAS-------------------------------GQWWRRRTQLSREKR 366

  Fly   625 ATLILGLIMGSFIACWLPFFFLYILVPACSSHCNIPESAFAVAFWLGYMNSALNPAIYTIFNKDF 689
            .|.:|.:::|.|:.||.||||.|.|...|..||.:|...|...||:||.||:|||.||||||:||
Mouse   367 FTFVLAVVIGVFVVCWFPFFFSYSLGAICPQHCKVPHGLFQFFFWIGYCNSSLNPVIYTIFNQDF 431

  Fly   690 RRAFRRIL 697
            ||||||||
Mouse   432 RRAFRRIL 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octalpha2RNP_001262715.1 7tm_1 132..>315 CDD:278431 89/184 (48%)
7tm_4 133..>252 CDD:304433 61/118 (52%)
Adra2bNP_033763.3 7tmA_alpha2B_AR 7..435 CDD:320444 185/587 (32%)
TM helix 1 14..40 CDD:320444 12/25 (48%)
TM helix 2 47..73 CDD:320444 14/25 (56%)
TM helix 3 85..115 CDD:320444 18/29 (62%)
TM helix 4 127..150 CDD:320444 9/22 (41%)
TM helix 5 169..198 CDD:320444 14/28 (50%)
PRK12323 <209..354 CDD:237057 49/294 (17%)
TM helix 6 362..392 CDD:320444 14/29 (48%)
TM helix 7 403..428 CDD:320444 14/24 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 276 1.000 Domainoid score I1724
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 313 1.000 Inparanoid score I2555
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001303
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24248
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.060

Return to query results.
Submit another query.