DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Octalpha2R and LOC100493940

DIOPT Version :10

Sequence 1:NP_001262715.1 Gene:Octalpha2R / 42258 FlyBaseID:FBgn0038653 Length:740 Species:Drosophila melanogaster
Sequence 2:XP_004912925.1 Gene:LOC100493940 / 100493940 XenbaseID:XB-GENE-29081959 Length:394 Species:Xenopus tropicalis


Alignment Length:620 Identity:168/620 - (27%)
Similarity:243/620 - (39%) Gaps:244/620 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 FYNQSSASGATSGNLTNPNHTEVHWDGRYPSGYTLTHIVIASIIVTILMIIIVVGNMLVIIAIAT 142
            |||.|..:.....|:         |.      ||.....:..|.|..:::..|:||:||::||.|
 Frog    11 FYNGSEETDQPQLNV---------WP------YTALECTLIIIAVVSIILSTVLGNILVVLAIFT 60

  Fly   143 EKSLKNIQNWFIASLAVADFFLGLIIMPFSLANELMGYWIFGSWWCDIHSAMDVLLCTASIMNLC 207
            .::|:..||.|:.|||.||..:|.:|:|||||.|:||||.|||.||.::.|:|:|.||:||::||
 Frog    61 SRALRAPQNLFLVSLASADILVGALIIPFSLAREVMGYWHFGSVWCSMYLALDILFCTSSIVHLC 125

  Fly   208 LISLDRYWSITKAVDYLKSRTPARAAVMITAVWIMSALICIPPLLGWKVKMPEGPLPKCELSEDI 272
            .||:|||||:||||.|...|||.|....|..:|::||:|..||||..|.|..|     |.|::|.
 Frog   126 AISIDRYWSVTKAVKYNLKRTPKRIKRSIAIIWVVSAIISFPPLLKSKHKEWE-----CLLNDDT 185

  Fly   273 GYVLYSALGSFYIPSCIMVFVYIRIYFAAKARARRGIKKHPRKTNNEQVTSFTTAKKGTIPMPSS 337
            .|||:|...||::|..||:.:|.|||..||.|                                 
 Frog   186 WYVLFSCTVSFFVPCLIMILLYCRIYRVAKHR--------------------------------- 217

  Fly   338 SGVSALQLHQQRQIATIETPPNSASLPMQIPTVTMDLASDISTSEAGELEAVAAQTVLAYANPNG 402
              ||:|:                            :..||.:::.||                  
 Frog   218 --VSSLR----------------------------NGVSDCNSAAAG------------------ 234

  Fly   403 AGTNSVTVVSSGNGGPGASGVPPSSPKETLQVSTIATGRVGLNVPVPPSMGSNSSINVLNNNNGT 467
                                                              |:..:.:.:.||:  
 Frog   235 --------------------------------------------------GTCETHHTIQNNH-- 247

  Fly   468 VAMDGGATAAGGGNGSAVATPGGLQQTGGNELRVSPIAGRCRALSVGVDTDMVSEFDPSSSDSGV 532
                                                               ...|.|...|.|.|
 Frog   248 ---------------------------------------------------EAEELDLEESTSSV 261

  Fly   533 VSRCAVVKPLKFRLCQPIFGRKSSNQQRRNEAKAAAKNQQSSGVASKNQQQQQQQQQQQVVKSEL 597
            ..                |.:|..::.:...:.|.||.      .|.:..:.||.:.|.:..|::
 Frog   262 HK----------------FPKKHHHKTKDKPSSAKAKR------LSWSSNRGQQHRDQSICISQM 304

  Fly   598 EPAIPKTPKPRDPEKEKRRIARKKEKRATLILGLIMGSFIACWLPFFFLYILVPACSSHCNIPES 662
                              |:.:.:|||.|.:|.:::|.|:.||.||||.|.|...|...|.|.::
 Frog   305 ------------------RLTQLREKRLTFVLAVVIGGFVICWFPFFFTYSLESVCRKRCGISDA 351

  Fly   663 AFAVAFWLGYMNSALNPAIYTIFNKDFRRAFRRIL 697
            .|...||:||.||:|||.|||:||:|||:||||||
 Frog   352 LFNFFFWIGYCNSSLNPIIYTVFNRDFRKAFRRIL 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octalpha2RNP_001262715.1 7tmA_alpha2_AR 132..>307 CDD:320187 89/174 (51%)
TM helix 2 150..176 CDD:320187 15/25 (60%)
TM helix 3 188..218 CDD:320187 17/29 (59%)
TM helix 4 230..253 CDD:320187 9/22 (41%)
TM helix 5 271..300 CDD:320187 14/28 (50%)
7tm_GPCRs <616..693 CDD:475119 37/76 (49%)
TM helix 6 626..648 CDD:410628 10/21 (48%)
TM helix 7 661..686 CDD:410628 13/24 (54%)
LOC100493940XP_004912925.1 7tmA_alpha-2D_AR 34..382 CDD:320447 154/576 (27%)
TM helix 1 35..61 CDD:320447 9/25 (36%)
TM helix 2 68..94 CDD:320447 15/25 (60%)
TM helix 3 106..136 CDD:320447 17/29 (59%)
TM helix 4 148..171 CDD:320447 9/22 (41%)
TM helix 5 184..213 CDD:320447 14/28 (50%)
TM helix 6 309..339 CDD:320447 14/29 (48%)
TM helix 7 350..375 CDD:320447 13/24 (54%)

Return to query results.
Submit another query.