DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octalpha2R and taar3

DIOPT Version :10

Sequence 1:NP_001262715.1 Gene:Octalpha2R / 42258 FlyBaseID:FBgn0038653 Length:740 Species:Drosophila melanogaster
Sequence 2:XP_004914927.3 Gene:taar3 / 100488107 XenbaseID:XB-GENE-1011223 Length:335 Species:Xenopus tropicalis


Alignment Length:602 Identity:115/602 - (19%)
Similarity:173/602 - (28%) Gaps:310/602 - (51%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 RYPSGYTLTHIVIASIIVTILMIIIVVGNMLVIIAIATEKSLKNIQNWFIASLAVADFFLGLIIM 169
            |.|:.|::..||:...|     |:..:||::|||:::..|.|.:..|:.|.||||.||.|||:||
 Frog    17 RSPASYSVMIIVMLGAI-----ILTTIGNLMVIISVSHFKQLHSPTNFLILSLAVTDFLLGLVIM 76

  Fly   170 PFSLANELMGYWIFGSWWCDIHSAMDVLLCTASIMNLCLISLDRYWSITKAVDYLKSRTPARAAV 234
            |:|:...|...|.||..:|.:|..:|:.|.|:||.:|..||:|||:::.:.:.|.|..|.....|
 Frog    77 PYSMVRSLTSCWYFGDLFCKLHGCIDMALSTSSIFHLFFISVDRYYAVCQPLHYYKCITNNVIQV 141

  Fly   235 MITAVWIMSALICIPPLLGWKVKMPEG---------PLPKCELSEDIGYVLYSALGSFYIPSCIM 290
            .:...|.:|.|....  |.:.....||         ....|.|:.:..:...|||.||:||..:|
 Frog   142 FLFISWSVSCLYSFG--LVFSNIHTEGIQHYIASFTCTGSCSLAFNKIWGAISALISFFIPGTLM 204

  Fly   291 VFVYIRIYFAAKARARRGIKKHPRKTNNEQVTSFTTAKKGTIPMPSSSGVSALQLHQQRQIATIE 355
            :.:||.|:..|..:|     ||....:|                                     
 Frog   205 IGIYIHIFSVANKQA-----KHMHNHHN------------------------------------- 227

  Fly   356 TPPNSASLPMQIPTVTMDLASDISTSEAGELEAVAAQTVLAYANPNGAGTNSVTVVSSGNGGPGA 420
                                                                             
 Frog   228 ----------------------------------------------------------------- 227

  Fly   421 SGVPPSSPKETLQVSTIATGRVGLNVPVPPSMGSNSSINVLNNNNGTVAMDGGATAAGGGNGSAV 485
              :.|..|...::||.                                                 
 Frog   228 --IQPDRPSIQIKVSV------------------------------------------------- 241

  Fly   486 ATPGGLQQTGGNELRVSPIAGRCRALSVGVDTDMVSEFDPSSSDSGVVSRCAVVKPLKFRLCQPI 550
                                                                             
 Frog   242 ----------------------------------------------------------------- 241

  Fly   551 FGRKSSNQQRRNEAKAAAKNQQSSGVASKNQQQQQQQQQQQVVKSELEPAIPKTPKPRDPEKEKR 615
                      |.|:|||                                   ||           
 Frog   242 ----------RAESKAA-----------------------------------KT----------- 250

  Fly   616 RIARKKEKRATLILGLIMGSFIACWLPFFFLYILVPACSSHCNIPESAFAVAFWLGYMNSALNPA 680
                         |.::||.|:.||||||.|.|:.|..  :.:..|..::...||||.||||||.
 Frog   251 -------------LSIVMGVFLFCWLPFFILTIVDPYI--NFSTSEHVYSTVLWLGYFNSALNPI 300

  Fly   681 IYTIFNKDFRRAFRRIL 697
            ||.:|...|::.|:.|:
 Frog   301 IYALFYPWFQKTFQFII 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octalpha2RNP_001262715.1 7tmA_alpha2_AR 132..>307 CDD:320187 64/183 (35%)
TM helix 2 150..176 CDD:320187 15/25 (60%)
TM helix 3 188..218 CDD:320187 13/29 (45%)
TM helix 4 230..253 CDD:320187 4/22 (18%)
TM helix 5 271..300 CDD:320187 11/28 (39%)
7tm_GPCRs <616..693 CDD:475119 28/76 (37%)
TM helix 6 626..648 CDD:410628 11/21 (52%)
TM helix 7 661..686 CDD:410628 13/24 (54%)
taar3XP_004914927.3 7tmA_TAAR2_3_4 23..313 CDD:320437 110/590 (19%)
TM helix 1 24..50 CDD:320437 9/30 (30%)
TM helix 2 57..83 CDD:320437 15/25 (60%)
TM helix 3 95..125 CDD:320437 13/29 (45%)
TM helix 4 137..160 CDD:320437 5/24 (21%)
TM helix 5 185..214 CDD:320437 11/28 (39%)
TM helix 6 242..272 CDD:320437 19/88 (22%)
TM helix 7 281..306 CDD:320437 13/24 (54%)

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