DRSC/TRiP Functional Genomics Resources

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Protein Alignment Octalpha2R and adra2c

DIOPT Version :9

Sequence 1:NP_001262715.1 Gene:Octalpha2R / 42258 FlyBaseID:FBgn0038653 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_001120375.1 Gene:adra2c / 100145449 XenbaseID:XB-GENE-5773399 Length:433 Species:Xenopus tropicalis


Alignment Length:614 Identity:178/614 - (28%)
Similarity:258/614 - (42%) Gaps:203/614 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 NLTNPNHTEVHWDGRYPSG-------YTLTHIVIASIIVTILMIIIVVGNMLVIIAIATEKSLKN 148
            |.|..|.|.      :||.       |::|.:...:.||..|:|..:|||:.|:||:.|.::||.
 Frog     6 NSTTTNSTP------FPSSGVRGVWPYSMTSVWCLAAIVGFLIIFTIVGNVFVVIAVLTSRALKA 64

  Fly   149 IQNWFIASLAVADFFLGLIIMPFSLANELMGYWIFGSWWCDIHSAMDVLLCTASIMNLCLISLDR 213
            .||.|:.|||.||..:..::|||||||||||||.||:.||||:.|:|||.||:||::||.|||||
 Frog    65 PQNLFLVSLASADILVAALVMPFSLANELMGYWYFGNVWCDIYLALDVLFCTSSIVHLCAISLDR 129

  Fly   214 YWSITKAVDYLKSRTPARAAVMITAVWIMSALICIPPLLGWKVKMPEGPLPKCELSEDIGYVLYS 278
            |||:|:||:|...|||.|...:|..||::||:|..|||:.......:...|:|:|::|..|:|.|
 Frog   130 YWSVTQAVEYNLKRTPRRIKGIIVTVWLISAVISFPPLISMDRDTEDDVYPQCKLNDDTWYILSS 194

  Fly   279 ALGSFYIPSCIMVFVYIRIYFAAKARARRGIKKHPRKTNNEQVTSFTTAKKGTIPMPSSSGVSAL 343
            .:|||:.|..||:.||||||..||.|.|...:|.|.:..:.. |....:|..|:.||        
 Frog   195 CIGSFFAPCIIMILVYIRIYQVAKLRTRTLSEKKPTRDGSSH-TENGFSKGTTVKMP-------- 250

  Fly   344 QLHQQRQIATIETPPNSASLPMQIPTVTMDLASDISTSEAGELEAVAAQTVLAYANPNGAGTNSV 408
                                                    |:.|                     
 Frog   251 ----------------------------------------GDKE--------------------- 254

  Fly   409 TVVSSGNGGPGASGVPPSSPKETLQVSTIATGRVGLNVPVPPSMGSNSSINVLNNNNGTVAMDGG 473
                :|:..|     .||.||.|                                          
 Frog   255 ----NGHCPP-----RPSPPKAT------------------------------------------ 268

  Fly   474 ATAAGGGNGSAVATPGGLQQTGGNELRVSPIAGRCRALSVGVDTDMVSEFDPSSSDSGVVSRCAV 538
                                                      |.:.:...:.|.|:|.       
 Frog   269 ------------------------------------------DVEDLELEESSMSESK------- 284

  Fly   539 VKPLKFRLCQPIFGRKSSNQQRRNEAKAAAKNQQSSGVASKNQQQQQQQQQQQVVKSELEPAIPK 603
                         .||||:::...::....|       .||.....:|..:.....::.......
 Frog   285 -------------RRKSSSKEDNTDSSKERK-------CSKGNSFSKQSSRLSRTSNKSMELFSS 329

  Fly   604 TPKPRDPEKEKRRIARKKEKRATLILGLIMGSFIACWLPFFFLYILVPACSSHCNIPESAFAVAF 668
            ..|.:.....:|::::.:|||.|.:|.::||.|:.||.||||.|.|...|...|.:||:.|...|
 Frog   330 RKKKKRSSVSRRKLSQAREKRFTFVLAVVMGVFVVCWFPFFFSYSLYGICREACEVPETLFKFFF 394

  Fly   669 WLGYMNSALNPAIYTIFNKDFRRAFRRIL 697
            |:||.||:|||.||||||:||||:|::|:
 Frog   395 WIGYCNSSLNPVIYTIFNQDFRRSFKKII 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Octalpha2RNP_001262715.1 7tm_1 132..>315 CDD:278431 95/182 (52%)
7tm_4 133..>252 CDD:304433 68/118 (58%)
adra2cNP_001120375.1 7tm_4 40..>168 CDD:304433 72/127 (57%)
7tm_1 48..408 CDD:278431 153/549 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 297 1.000 Domainoid score I1441
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 333 1.000 Inparanoid score I2375
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D323202at33208
OrthoFinder 1 1.000 - - FOG0001303
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR24248
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.070

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