DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7720 and Smvt

DIOPT Version :9

Sequence 1:NP_001163649.1 Gene:CG7720 / 42257 FlyBaseID:FBgn0038652 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_651891.2 Gene:Smvt / 43744 FlyBaseID:FBgn0039873 Length:591 Species:Drosophila melanogaster


Alignment Length:574 Identity:158/574 - (27%)
Similarity:286/574 - (49%) Gaps:46/574 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DYLMFVLFIALTVLGPLWKRIFGKKKERSKADYVFATGGVSIVAVMISIARGTLGVRSVLGYPSE 75
            ||.:|.|.::::....::...|.|.::.:: :|:.....:..:.:.||:....|...|::..|:|
  Fly    28 DYGVFALVLSISAAIGVYFGFFAKGEDTTE-EYLMGGKRMKTIPIAISLVASQLSAISIMTIPAE 91

  Fly    76 LYYRGSAMWEIIYGMMSAYPIVCFMFVPVYFNLGITSVYQYIDLRFKSRTVRCLASATYIVRQIC 140
            :|..|......:..|:...|::.::.:||::|..||:.|:|:::|| .|.||.|.:..:|:....
  Fly    92 MYAYGINWVFNVVCMVLVVPLLNYLVIPVFYNNNITNCYEYLEMRF-CRKVRVLQTFIFILTMFF 155

  Fly   141 NLGITVYTPSVALSTVIGIPYWASITGMAVICIFFTIMGGLKAAINADVIQTVTILVVTVAVCIQ 205
            .|.|.::.||:|.:.|.|.......|.:..||:|:|:.||:||.:..||||...::...|.|.:.
  Fly   156 MLPIFIFLPSLAFAQVTGFNVHLINTVVCSICVFYTMFGGIKAVVWTDVIQAAIMVASVVLVGVL 220

  Fly   206 GTISTGGVKKVYQLNRDNGRLNFWNFTGDMTVRVDTTSAWLGQLFMSLSQIGCQQNFMQRYVSLK 270
            |....||..:|.::..:.|||:. |:..|:|.|....:.:.....|....:|..|:.:||.|||.
  Fly   221 GAHRVGGFFEVLRIAGEGGRLDI-NYNFDLTTRSTIWNIFTSATMMWTGYVGLNQSCVQRIVSLP 284

  Fly   271 SLKQVRRVMLT---NVPLVFFFFSISWISGMVIYSTYINCDPYAEGYIKKPDEILPFFVEDQLGF 332
            ||...||.::.   ...|:.||   :..:|:||||.:.:|||...|::.|.|:::|:||:|.:|.
  Fly   285 SLGHARRSLVLFGFGFILIMFF---NCFTGIVIYSRFHDCDPIQSGHVSKVDKMVPYFVQDTVGN 346

  Fly   333 LPGFVGIFMATLFNGALCMMVSNLNSLATVIWEDFISQLPKFKGLSDKQQLRILKSITVVCGL-I 396
            |.|..|:|::.:|:.||..:.:::|||..|::.|:|.  |..:....:..: |:|......|: .
  Fly   347 LWGMPGVFISCVFSAALSTLSASINSLGGVVYFDYIK--PHIRHTEHRANV-IMKLFVFFTGIYC 408

  Fly   397 IMGVAFGVGLLAGVIESSLLVF----SATSGPLLGCFILAMMVPIANWKGTSAGMVT--ACAFVL 455
            |:|     |::.....|.|.|.    ..:.|...|.|:|.|:||.::.:....|::.  ||...:
  Fly   409 ILG-----GMVIENFNSILQVIYSIGGMSFGSTCGVFMLGMLVPKSHGRAALVGVLASIACMATI 468

  Fly   456 WIIGGGMTVTKDNPLLPTSTDGCTNDTFAQSIGKPIVEQGQMPWLLSHTPIDGFNQSFVPTQPTI 520
            .|:..|   ......|||||..|           |....|.:..:.:.:|:      |:.: .|.
  Fly   469 VILSWG---RNHYDTLPTSTSAC-----------PASLNGTIKDISTASPL------FLGS-TTE 512

  Fly   521 APERSGLETFYSISFMYYSLIGTALTVIIGTVIS-LLTQHPDDAYDGKLLHPLI 573
            ||......:...:||.:|::.|..:|.:||..:| :|...||...:.|||.|::
  Fly   513 APVGEKEFSILDLSFNWYTVTGFVITWLIGIPLSYILKSGPDYKPNPKLLSPVV 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7720NP_001163649.1 SLC5sbd_NIS-SMVT 10..556 CDD:271383 151/555 (27%)
SmvtNP_651891.2 SLC5sbd_NIS-SMVT 27..548 CDD:271383 151/554 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 74 1.000 Domainoid score I2508
eggNOG 1 0.900 - - E1_COG0591
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 102 1.000 Inparanoid score I307
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D489472at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9745
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42985
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
76.970

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