DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7720 and Slc5a6

DIOPT Version :9

Sequence 1:NP_001163649.1 Gene:CG7720 / 42257 FlyBaseID:FBgn0038652 Length:681 Species:Drosophila melanogaster
Sequence 2:NP_570102.1 Gene:Slc5a6 / 170551 RGDID:69648 Length:634 Species:Rattus norvegicus


Alignment Length:655 Identity:183/655 - (27%)
Similarity:312/655 - (47%) Gaps:73/655 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DYLMFVLFIALTVLGPLWK--RIFGKKKERSKADYVFATGGVSIVAVMISIARGTLGVRSVLGYP 73
            ||::|.|.:.|:::..|:.  |.:|:   .:..:.:.|...:..:.|.:|:........::||.|
  Rat    27 DYVVFGLLLVLSLVIGLYHACRGWGR---HTVGELLMADRKMGCLPVALSLLATFQSAVAILGGP 88

  Fly    74 SELYYRGSAMWEIIYGMMSAYPIVCFMFVPVYFNLGITSVYQYIDLRFKSRTVRCLASATYIVRQ 138
            :|:|..|:..|.:.........|...:|:||::.|.:||.|:|::||| ::.||...:.|:|.:.
  Rat    89 AEIYRFGTQYWFLGCSYFLGLLIPAHIFIPVFYRLHLTSAYEYLELRF-NKAVRICGTVTFIFQM 152

  Fly   139 ICNLGITVYTPSVALSTVIGIPYWASITGMAVICIFFTIMGGLKAAINADVIQTVTILVVTVAVC 203
            :..:|:.:|.||:||:.|.|...|.|:..:.::|..:|.:|||||.|..||.||:.:.:..:.|.
  Rat   153 VVYMGVALYAPSLALNAVTGFDLWLSVLALGIVCNIYTALGGLKAVIWTDVFQTLIMFLGQLVVI 217

  Fly   204 IQGTISTGGVKKVYQLNRDNGRLNFWNFTGDMTVRVDTTSAWLGQLFMSLSQIGCQQNFMQRYVS 268
            |.|....||:..|:.:...:|.::......|..||....:...|.:||.||..|..|..:|||:|
  Rat   218 IVGAAKVGGLGHVWAVASQHGLISGIELDPDPFVRHTFWTLAFGGVFMMLSLYGVNQAQVQRYLS 282

  Fly   269 LKSLKQVRRVMLTNVPLVFFFFSISWISGMVIYSTY--INCDPYAEGYIKKPDEILPFFVEDQLG 331
            ..|.|..........|.......:|.:.|:|:::.|  .:..|..|.  ..||:::.:||.|.|.
  Rat   283 SHSEKAAVLSCYAVFPCQQVALCMSCLIGLVMFAYYKKYSMSPQQEQ--AAPDQLVLYFVMDLLK 345

  Fly   332 FLPGFVGIFMATLFNGALCMMVSNLNSLATVIWEDFISQLPKFKGLSDKQQLRILKSITVVCGLI 396
            .:||..|:|:|.||:|:|..:.|..||||||..||.|.  |.|..|::.:.:.:.:|:....||:
  Rat   346 DMPGLPGLFVACLFSGSLSTISSAFNSLATVTMEDLIQ--PWFPQLTETRAIMLSRSLAFAYGLV 408

  Fly   397 IMGVAFGVGLLAGVIESSLLVFSATSGPLLGCFILAMMVPIANWKGTSAGMVTACAFVLWIIGGG 461
            .:|:|:....|..|::::|.:|....|||||.|.|.|..|.||..|...|::|......| ||.|
  Rat   409 CLGMAYVSSHLGSVLQAALSIFGMVGGPLLGLFCLGMFFPCANPLGAIVGLLTGLTMAFW-IGIG 472

  Fly   462 MTVTKDNPLLPTSTDGCTNDTFAQSIGKPIVEQGQMPWLLSHTPIDGFNQSFVPTQPTIA----- 521
            ..|::                .:.:...|              |::| :.||:|:..|:|     
  Rat   473 SIVSR----------------MSSAAASP--------------PLNG-SSSFLPSNLTVATVTTL 506

  Fly   522 -----PERSGLETFYSISFMYYSLIGTALTVIIGTVISLLTQHPDDAYDGKLLHP-LIFRLCERF 580
                 .:.:||:.|||:|:::||...:...:.:|.::||||    ....|:.|:| .|:.:..:.
  Rat   507 MPSTLSKPTGLQQFYSLSYLWYSAHNSTTVIAVGLIVSLLT----GGMRGRSLNPGTIYPVLPKL 567

  Fly   581 SGRKPYYVKHEEESGLNGRSSSDSSATTTTCKAEKVNHGYESSPEDKEK----------SSPIAV 635
            ....|...    :..|..||.:......|....||:.:|......|||:          .||..:
  Rat   568 LALLPLSC----QKRLCWRSHNQDIPVVTNLFPEKMGNGALQDSRDKERMAEDGLVHQPCSPTYI 628

  Fly   636 VFTTS 640
            |..||
  Rat   629 VQETS 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7720NP_001163649.1 SLC5sbd_NIS-SMVT 10..556 CDD:271383 160/558 (29%)
Slc5a6NP_570102.1 SLC5-6-like_sbd 23..548 CDD:382020 163/564 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D489472at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR42985
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.020

Return to query results.
Submit another query.