DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGS1 and pssA

DIOPT Version :10

Sequence 1:NP_650751.3 Gene:PGS1 / 42254 FlyBaseID:FBgn0038649 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_417080.4 Gene:pssA / 947059 ECOCYCID:EG10781 Length:451 Species:Escherichia coli


Alignment Length:480 Identity:111/480 - (23%)
Similarity:188/480 - (39%) Gaps:129/480 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 DQIQVIHEPKHFYETLVQRIGQAKRRIVLASLYL-----GTGQLENAMVQTLRHSLEQQSALRLN 119
            |.:...:.|..|.|||:::|..||:||.:.:|||     |.|.| ||:.:..|    |:..|.:.
E. coli    25 DDVDFFYAPADFRETLLEKIASAKQRICIVALYLEQDDGGKGIL-NALYEAKR----QRPELDVR 84

  Fly   120 VLLDFTRGTRGTLNSKTMLLPLVRDFASQVQLSLYHTPDLRGMTKRLA-------------PPRW 171
            ||:|:.|..||.:.:.          ||......|         .|:|             |...
E. coli    85 VLVDWHRAQRGRIGAA----------ASNTNADWY---------CRMAQENPGVDVPVYGVPINT 130

  Fly   172 NELLGLQHMKVYLFDDAVIISGANLSNDYFTN----RQDRYILIEDKPLADFYAQF--------- 223
            .|.||:.|.|.::.||:|:.|||:|::.|...    |.|||.||.::.::|...::         
E. coli   131 REALGVLHFKGFIIDDSVLYSGASLNDVYLHQHDKYRYDRYHLIRNRKMSDIMFEWVTQNIMNGR 195

  Fly   224 -IERVQEFSLAVAPDASEGLHRNWRILPYEGTKEQFIQLARKRISDLVQETFQRQARTKEQNPQA 287
             :.|:.:.:...:|:....                 |:|.|:.:.|.... ||..|    .|.|.
E. coli   196 GVNRLDDVNRPKSPEIKND-----------------IRLFRQELRDAAYH-FQGDA----DNDQL 238

  Fly   288 DTWIFPLLEMGQIGIHHDSVVTKRL--LSNCLSGSRLKLATGYFN----LTQEYMDTLTHKCLAQ 346
            .  :.||     :|:...|::.|.:  |..| :..:|.:.|.|||    |.:..:..|...  .:
E. coli   239 S--VTPL-----VGLGKSSLLNKTIFHLMPC-AEQKLTICTPYFNLPAILVRNIIQLLREG--KK 293

  Fly   347 CSILMAHPNANGFQGAKGP----AGGIPAAYTLIAKSFYESLVRRKQNHRVNFFEYEKPGW---- 403
            ..|::....||.|...:..    .|.:|..|.:..:.|...|     .:.||..:.....|    
E. coli   294 VEIIVGDKTANDFYIPEDEPFKIIGALPYLYEINLRRFLSRL-----QYYVNTDQLVVRLWKDDD 353

  Fly   404 -TYHAKGLWYYLPEAILPNLTLIGSSNFGERSVNRDLETQVCLVTANKDLSQRLQAEADRL---- 463
             |||.||:|      :.....||..:|...|:...|||..:.:.....:|:.:.:.|.:.:    
E. coli   354 NTYHLKGMW------VDDKWMLITGNNLNPRAWRLDLENAILIHDPQLELAPQREKELELIREHT 412

  Fly   464 ------YDLSQTAE-----REIVQR 477
                  .||...|:     |::::|
E. coli   413 TIVKHYRDLQSIADYPVKVRKLIRR 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGS1NP_650751.3 PLDc_PGS1_euk_1 61..227 CDD:197233 53/197 (27%)
PLDc_PGS1_euk_2 289..474 CDD:197235 45/214 (21%)
pssANP_417080.4 pssA 1..431 CDD:236510 109/472 (23%)

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