DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGS1 and clsB

DIOPT Version :10

Sequence 1:NP_650751.3 Gene:PGS1 / 42254 FlyBaseID:FBgn0038649 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_415310.1 Gene:clsB / 945409 ECOCYCID:G6406 Length:413 Species:Escherichia coli


Alignment Length:471 Identity:91/471 - (19%)
Similarity:160/471 - (33%) Gaps:165/471 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 CFPLRGDQIQVIHEPKHFYETLVQRIGQAKRRIVLASLY-----LGTGQLENAMVQTLRHSLEQQ 113
            |....|::||::...:.:|..:.:.||:|:.||:|.:..     :|. ||..|::..      .|
E. coli     3 CSWREGNKIQLLENGEQYYPAVFKAIGEAQERIILETFIWFEDDVGK-QLHAALLAA------AQ 60

  Fly   114 SALRLNVLLDFTRGTRGTLNSKTMLLPLVRDFASQVQLSLYHTPDL----------RGMTKRLAP 168
            ..::..||||.                             |.:|||          .|:..|...
E. coli    61 RGVKAEVLLDG-----------------------------YGSPDLSDEFVNELTAAGVVFRYYD 96

  Fly   169 PRWNELLGLQ-------HMKVYLFDDAV-IISGANLSNDYFTN-----RQDRYILIEDKPLADFY 220
            || ..|.|::       |.|:.:.|..: .|.|.|.|.::.::     :||..:.:|        
E. coli    97 PR-PRLFGMRTNVFRRMHRKIVVIDARIAFIGGLNYSAEHMSSYGPEAKQDYAVRLE-------- 152

  Fly   221 AQFIERVQEFSLAVAPDASEGLHRNWR----------------ILPYEGTKEQFIQLARKRISDL 269
            ...:|.:.:|.|...|..| ...|.||                :|.:...:|....:.|..:..|
E. coli   153 GPIVEDILQFELENLPGQS-AARRWWRRHHKAEENRQPGEAQVLLVWRDNEEHRDDIERHYLKML 216

  Fly   270 VQETFQRQARTKEQNPQADTWIFPLLEMGQIGIHHDSVVTKRLLSNCLSGSRLKLATGYFNLTQE 334
            .|        .:.:...|:.:.||    |...:|......:|       |.|:||          
E. coli   217 TQ--------ARREVIIANAYFFP----GYRFLHALRKAARR-------GVRIKL---------- 252

  Fly   335 YMDTLTHKCLAQCSILMAHPNANGFQGAKGPAGGIPAAYTLIAKSFYESLVRRKQNHRVNFFEYE 399
                          |:...|:             :|.. .:.|:..|..||:    ..|..|||.
E. coli   253 --------------IIQGEPD-------------MPIV-RVGARLLYNYLVK----GGVQVFEYR 285

  Fly   400 KPGWTYHAKGLWYYLPEAIL-PNLTLIGSSNFGERSVNRDLETQVCLVTANKDLSQRLQAEADRL 463
            :.  ..|.|       .|:: .:...:||||....|::.:||..|  :..::..:|.|:...:.:
E. coli   286 RR--PLHGK-------VALMDDHWATVGSSNLDPLSLSLNLEANV--IIHDRHFNQTLRDNLNGI 339

  Fly   464 Y--DLSQTAEREIVQR 477
            .  |..|..|..:.:|
E. coli   340 IAADCQQVDETMLPKR 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGS1NP_650751.3 PLDc_PGS1_euk_1 61..227 CDD:197233 39/193 (20%)
PLDc_PGS1_euk_2 289..474 CDD:197235 36/187 (19%)
clsBNP_415310.1 PRK11263 2..412 CDD:236888 91/471 (19%)

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