DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PGS1 and PLDALPHA3

DIOPT Version :10

Sequence 1:NP_650751.3 Gene:PGS1 / 42254 FlyBaseID:FBgn0038649 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_197919.1 Gene:PLDALPHA3 / 832609 AraportID:AT5G25370 Length:820 Species:Arabidopsis thaliana


Alignment Length:544 Identity:101/544 - (18%)
Similarity:161/544 - (29%) Gaps:215/544 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 LAPCFPLRGDQI----QVIHEPKHFYETLV---QRIGQ-AKRRIVLASLYLGTGQLENAMVQTLR 107
            |.|..|..||.|    :|.....|..:|:|   :..|. .|||||   .:||...|.:....|:.
plant   315 LCPRNPDNGDSIVQGFEVATMFTHHQKTIVVDSEVDGSLTKRRIV---SFLGGIDLCDGRYDTVE 376

  Fly   108 HSLEQQSALRLNVLLDFTRGTRGTLNSKTMLLPLVRDFASQVQLSLYHTPDLRGMTKRLAPPR-- 170
            |.|                  .|||||              |..:.:|.|:..|.:.:...||  
plant   377 HPL------------------FGTLNS--------------VHANDFHQPNFDGASIKKGGPREP 409

  Fly   171 WNELLGLQHMK---------VYLFDDAVIISGANLSNDYFTNRQDRYILIEDKPLADFYAQFIER 226
            |:::    |.|         :|.|:...:..|:.           |..||....||:.....:..
plant   410 WHDI----HCKLDGPAAWDVLYNFEQRWMKQGSG-----------RRYLISMAQLAEITVPPLPI 459

  Fly   227 VQEFSLAVAPDASEGLHRNWRILPY----EGTKEQFIQLARKR------------ISDLVQETFQ 275
            ||       ||..||    |.:..:    :|..|.|.:..|:.            |...:|:.:.
plant   460 VQ-------PDNEEG----WTVQVFRSIDDGAVEGFPEDPREAASIGLISGKDNVIERSIQDAYV 513

  Fly   276 RQARTKEQNPQADTWIFPLLEMG----QIGIHHDSV-------VTKRLLSNCLSGSR-------- 321
            ...|..:.....:...|.....|    .|.::..:.       ::.:::|...:|.|        
plant   514 NAIRRAKNFIYIENQYFLGSSFGWNSRDINLNEINALQLIPKEISLKIVSKIEAGERFSVYIVIP 578

  Fly   322 -----------LKLATGYFNLTQEYM------------------DTLTHKCLAQCSILMAHPNAN 357
                       ::....:...|.|.|                  |.||..||.            
plant   579 LWPEGKPGSASVQAILDWQRRTMEMMYTDIIIALRKKGLDANPRDYLTFFCLG------------ 631

  Fly   358 GFQGAKGPAGGIPAAYTLIAKSFYESLVRRKQNHRVNFFEYEKPGWTYHAKGLWYYLPEAILPNL 422
              ...||..|    .|....|....|...|.|..| .|..|      .|:|.:      .:....
plant   632 --NREKGKVG----EYLPPEKPEANSDYARAQESR-RFMIY------VHSKMM------IVDDEY 677

  Fly   423 TLIGSSNFGERSVNRDLETQVCL---------------------------------VTAN----- 449
            .:|||:|..:||::...:|::.:                                 ||.|     
plant   678 IIIGSANINQRSMDGGRDTEIAMGAYQPSHLLSTNNMRPVGQIFSFRISLWLEHLRVTTNAFQCP 742

  Fly   450 --KDLSQRLQAEADRLYDLSQTAE 471
              ::..:.:.|.||.|:.|....|
plant   743 ESEECIRMVNATADELWGLYSAQE 766

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGS1NP_650751.3 PLDc_PGS1_euk_1 61..227 CDD:197233 39/184 (21%)
PLDc_PGS1_euk_2 289..474 CDD:197235 43/271 (16%)
PLDALPHA3NP_197919.1 PLN02270 3..820 CDD:165912 101/544 (19%)

Return to query results.
Submit another query.