DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGS1 and PLDBETA1

DIOPT Version :10

Sequence 1:NP_650751.3 Gene:PGS1 / 42254 FlyBaseID:FBgn0038649 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_001324696.1 Gene:PLDBETA1 / 818802 AraportID:AT2G42010 Length:1108 Species:Arabidopsis thaliana


Alignment Length:277 Identity:51/277 - (18%)
Similarity:86/277 - (31%) Gaps:103/277 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 GFP-GAPALESLSWLHNLAPCFPLRGDQIQVIHEPKHFYETLVQR----------------IGQA 82
            |.| ||.....|.|.|.          .||:::|.  .|:.||:.                :|  
plant   847 GVPTGAATQRILYWQHK----------TIQMMYET--IYKALVETGLEGAFSPQDYLNFFCLG-- 897

  Fly    83 KRRIVLASLYLGTGQLENAMVQTLRHSLEQQSALRLNVLLDFTRGTRGTLNSKTMLLPLVRDFAS 147
            .|.:|......|||...||....:   .:::..|.|..|:...||           :|:|     
plant   898 NREMVDGIDNSGTGSPSNANTPQV---TKRRECLLLKFLMFLKRG-----------VPVV----- 943

  Fly   148 QVQLSLYHTPDLRGMTKRLAPPRWNELLGLQHMKVYLFDDA-VIISGANLSNDYFTNRQDRYILI 211
                       |:.::::.     ...:...|.|..:.||. |:|..||::.......:|..|.:
plant   944 -----------LQALSRKS-----RRFMVYVHSKGMVVDDEYVVIGSANINQRSMEGTRDTEIAM 992

  Fly   212 ------------EDKPLADFYAQFIERVQEFSLAV-----APDASEGL-------HRNWRILPYE 252
                        ...|....|...:....|....:     .|::.|.:       .|||:     
plant   993 GAYQPQHTWARKHSGPRGQIYGYRMSLWAEHMATLDDCFTQPESIECVRKVRTMGERNWK----- 1052

  Fly   253 GTKEQFIQLARKRISDL 269
                   |.|.:.:||:
plant  1053 -------QFAAEEVSDM 1062

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGS1NP_650751.3 PLDc_PGS1_euk_1 61..227 CDD:197233 34/194 (18%)
PLDc_PGS1_euk_2 289..474 CDD:197235
PLDBETA1NP_001324696.1 DUF1373 72..>180 CDD:462093
PLN03008 263..1107 CDD:178585 51/277 (18%)
Blue background indicates that the domain is not in the aligned region.

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