DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7718 and pld1b

DIOPT Version :9

Sequence 1:NP_650751.3 Gene:CG7718 / 42254 FlyBaseID:FBgn0038649 Length:494 Species:Drosophila melanogaster
Sequence 2:XP_021326023.1 Gene:pld1b / 572492 ZFINID:ZDB-GENE-070510-3 Length:1042 Species:Danio rerio


Alignment Length:634 Identity:108/634 - (17%)
Similarity:196/634 - (30%) Gaps:241/634 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 KHFYETLVQRIGQAKRRIVLASLYLGTG-QLENAMVQTLRHSLEQ------QSALRLNVLL---- 122
            |.:.|.:...:.:|:..|.:...:|... .|:..:|:..|..|:.      |..:|:.|:|    
Zfish   368 KQYMEDVANALEEAEEEIFITDWWLSPEIFLKRPVVEGNRWRLDSILKRQAQKGVRIFVMLYKEV 432

  Fly   123 DFTRGTRGTLNSKTML-----LPLVRDFASQVQLSLYHTPDLRGMTKRLAPPRWNELLGLQHMKV 182
            :...|.....:.:|:|     :.::| ....|..|:|                    |...|.|:
Zfish   433 ELALGINSEYSKRTLLQLHPNIKVMR-HPDHVSSSVY--------------------LWAHHEKI 476

  Fly   183 YLFDDAV-IISGANLSNDYFTNRQDRYI------------------------------------- 209
            .:.|.:| .:.|.:|:...:.:|:.|..                                     
Zfish   477 VVIDQSVAFVGGIDLAYGRWDDREHRLTDIGSVTRTLPVSAENASEASPAMAAPSNGPSAALANG 541

  Fly   210 -----------------------------LIEDKPLADFYAQFIERVQEFSLAV----------- 234
                                         |.:.:|.:......:|..:|.|.|.           
Zfish   542 KNVPADTADQPKLKGHGKPKKTRFSIRRHLQKHRPTSGDSVSSVESSEEKSEATQDLQADVIGLM 606

  Fly   235 -------APDASEGLHRNWRIL--PYEGTKEQFI---------------QLARKRISDLVQETFQ 275
                   ..|....:|::|..|  |::...::.|               |.||    |:.:...|
Zfish   607 GNTRFWHGKDYCNFVHKDWIQLDKPFDDFIDRHITPRMPWHDIASVVHGQAAR----DVARHFIQ 667

  Fly   276 RQARTKEQNPQADTWIFPLL------EMGQI-----GIHHDSVVTKRLLSNCLSGSRL---KLAT 326
            |...||...|:..:..:|.|      ...:|     |....:|...|..|:..:|.:.   .:.|
Zfish   668 RWNFTKIMKPKYRSLSYPYLLPKSHTTANEIKYQVPGCTQTNVQVLRSASDWSAGIKYHEESIHT 732

  Fly   327 GYFNL---TQEYMDTLTHKCLAQCS----------------ILMAH------------PNANGFQ 360
            .|.|.   :|.|: .:.::....|:                |:.|:            |...||:
Zfish   733 AYVNAIEHSQHYI-YIENQFFISCADSKVVHNRIGDAIAKRIIKAYRDGKKYRVYVVTPLLPGFE 796

  Fly   361 GAKGPAGGIPAAYTLIAKSFYESLVR---------RKQ--NHRVNFFEYEKPGWTYHAK------ 408
            |.....||  :|...:....|.:::|         :|:  :..:|:..:  .|...||:      
Zfish   797 GDINTGGG--SAIQAVMHFNYRTMIRGDCSIISQLKKEMGDQWINYISF--GGLRTHAELEGRLV 857

  Fly   409 -GLWYYLPEAIL--PNLTLIGSSNFGERSV--NRDLETQVC-----LVTANKD----------LS 453
             .|.|...:.::  .|..:|||:|..:||:  .||.|..|.     .|.:..|          ||
Zfish   858 TELIYVHSKMLIADDNTVIIGSANINDRSMLGKRDSEVAVIYEDIHTVKSVMDGQEYQAGPFGLS 922

  Fly   454 QRLQ-------AEADRLYD----LSQTAEREIVQRPVPRWVQAVVRIFR 491
            .||:       |..|...|    :|....:|:......|......|:||
Zfish   923 LRLECFRMILGANTDPSIDVTDPISDQFYKEVWMSTAARNATIYQRVFR 971

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7718NP_650751.3 PLDc_PGS1_euk_1 61..227 CDD:197233 32/240 (13%)
PLDc_2 75..226 CDD:289836 29/233 (12%)
PLDc_PGS1_euk_2 289..474 CDD:197235 53/277 (19%)
pld1bXP_021326023.1 PLN03008 67..1027 CDD:331186 108/634 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1502
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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