DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGS1 and pld6

DIOPT Version :10

Sequence 1:NP_650751.3 Gene:PGS1 / 42254 FlyBaseID:FBgn0038649 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_001082883.1 Gene:pld6 / 567338 ZFINID:ZDB-GENE-030131-3825 Length:227 Species:Danio rerio


Alignment Length:130 Identity:29/130 - (22%)
Similarity:52/130 - (40%) Gaps:32/130 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 FTRGTRGTLNSKTMLLPLVRDFASQVQLS----LYHTPDLRGMTKRLAPPR-WNELLGLQ----- 178
            |:|.....|:::|.|...:..| |.:::|    |.|.   ||:..|:...| :..:.|.|     
Zfish    81 FSRLLEHLLSARTSLEMCIFSF-SNMEMSRAILLLHK---RGVVVRVVTDRDYMTITGSQIGALR 141

  Fly   179 ----------------HMKVYLFDDAVIISGA-NLSNDYFTNRQDRYILIEDKPLA-DFYAQFIE 225
                            |.|..|.|...:|||: |.:.....:.::..|:.|:..|. .|..:|::
Zfish   142 KAGISVRHEMSSAVHMHHKFALVDGRKLISGSLNWTLTAVQSNKENVIITEEPELVRPFQQEFLK 206

  Fly   226  225
            Zfish   207  206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGS1NP_650751.3 PLDc_PGS1_euk_1 61..227 CDD:197233 29/130 (22%)
PLDc_PGS1_euk_2 289..474 CDD:197235
pld6NP_001082883.1 PLDc_vPLD6_like 71..208 CDD:197268 29/130 (22%)
Blue background indicates that the domain is not in the aligned region.

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