DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGS1 and Pld

DIOPT Version :10

Sequence 1:NP_650751.3 Gene:PGS1 / 42254 FlyBaseID:FBgn0038649 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_001137610.1 Gene:Pld / 35554 FlyBaseID:FBgn0286511 Length:1364 Species:Drosophila melanogaster


Alignment Length:319 Identity:60/319 - (18%)
Similarity:114/319 - (35%) Gaps:91/319 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 LESLS-WLHNLAPCFPLRGDQI-QVIHEPKHFYETLVQRIGQAKRRIVL-----ASLYLGTG--- 96
            |.|:| |     .|..:..|.: |.||      :..:|.|.:|:..:.:     .::.||.|   
  Fly  1020 LRSVSAW-----SCGFIEADLVEQSIH------DAYIQTITKAQHYVYIENQFFITMQLGMGVPG 1073

  Fly    97 -------QLENAMVQTLRHSLEQQSALRLNVLLDFTRGTRGTLNSKTMLLPLVRDFASQVQLSLY 154
                   |:...:.:.:..:.:::...|:.|::....|..|.:...|.:........:...:|  
  Fly  1074 AYNNVRNQIGETLFKRIVRAHKERKPFRVYVIMPLLPGFEGDVGGSTGIAVRAITHWNYASIS-- 1136

  Fly   155 HTPDLRGMTKRLA---------PPRWNELLGLQ----------------HMKVYLFDDAVIISG- 193
                 ||.|..|.         |..:.....|:                |.|:.:.||.|:|.| 
  Fly  1137 -----RGRTSILTRLQEAGIANPENYISFHSLRNHSFLNNTPITELIYVHSKLLIADDRVVICGS 1196

  Fly   194 ANLSNDYFTNRQDRYI--LIEDKPLADFYAQ--------FIERVQE--FSLAVAPDASEG----- 241
            ||:::.....::|..|  ::.|:...|....        |..|:::  |...:....|||     
  Fly  1197 ANINDRSMIGKRDSEIAAILMDEEFEDGRMNGKKYPSGVFAGRLRKYLFKEHLGLLESEGSSRSD 1261

  Fly   242 -----------LHRNWRILPYEGTKEQFIQLARKRISDLVQETFQRQARTKEQNPQADT 289
                       .|..||.:..:.| |.:.::.:...:|.| :||....:.:|:.|.|.|
  Fly  1262 LDINDPVCEKFWHGTWRRISMQNT-EIYDEVFKCIPTDFV-KTFASLRKYQEEPPLAKT 1318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGS1NP_650751.3 PLDc_PGS1_euk_1 61..227 CDD:197233 36/217 (17%)
PLDc_PGS1_euk_2 289..474 CDD:197235 1/1 (100%)
PldNP_001137610.1 PX_PLD 230..431 CDD:132805
PLN02866 388..1349 CDD:215467 60/319 (19%)
Blue background indicates that the domain is not in the aligned region.

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