DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7718 and Pgs1

DIOPT Version :9

Sequence 1:NP_650751.3 Gene:CG7718 / 42254 FlyBaseID:FBgn0038649 Length:494 Species:Drosophila melanogaster
Sequence 2:XP_006247917.1 Gene:Pgs1 / 303698 RGDID:1305052 Length:553 Species:Rattus norvegicus


Alignment Length:481 Identity:212/481 - (44%)
Similarity:296/481 - (61%) Gaps:39/481 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 WLHNLAPCFPLRGDQIQVIHEPKHFYETLVQRIGQAKRRIVLASLYLGTGQLENAMVQTLRHSLE 111
            |:.||.|.|.:....::|:..|..|:|.:..:|..||||:|:||||||||.||..:|..|..|||
  Rat    79 WIRNLVPEFGVSSSHVRVLSSPAEFFELMKGQIKIAKRRVVMASLYLGTGPLEQELVDCLESSLE 143

  Fly   112 QQ------SALRLNVLLDFTRGTRGTLNSKTMLLPLVRDFASQVQLSLYHTPDLRGMTKRLAPPR 170
            :.      |.|::::|||||||:||..||:||||||::.|...|::||:|||:|||:.:.|.|.|
  Rat   144 KSLQAKFPSDLKVSILLDFTRGSRGRKNSRTMLLPLLQRFPEHVRVSLFHTPNLRGLLRLLIPER 208

  Fly   171 WNELLGLQHMKVYLFDDAVIISGANLSNDYFTNRQDRYILIED-KPLADFYAQFIERVQEFSLAV 234
            :||.:||||:||||||:.||:||||||:.|||||||||:.::| ..:|||:.:.::.|.:.||.:
  Rat   209 FNETIGLQHIKVYLFDNNVILSGANLSDSYFTNRQDRYVFLQDCAEIADFFTELVDAVGDVSLQL 273

  Fly   235 APDAS----EGLHRNWRILPYEGTKEQFIQLARKRISDLVQETFQRQ------------------ 277
            ..|.:    :|:     :.||:|.:..:.:.|.||:.|::.....||                  
  Rat   274 QGDDTVEVVDGM-----VHPYKGDRAAYCRAANKRVMDVIHSARTRQQMLHAQTFHSDSLLSQEE 333

  Fly   278 -ARTKEQNPQADTWIFPLLEMGQIGIHHDSVVTKRLLSNCLSGSRLKLATGYFNLTQEYMDTLTH 341
             |...::.|..||||:||::|....|..|.:||:.||:....|:::.|.||||||||.||| |..
  Rat   334 AAAAGDRRPAPDTWIYPLIQMKPFEIQIDEIVTETLLTEAERGAKVFLTTGYFNLTQAYMD-LVL 397

  Fly   342 KCLAQCSILMAHPNANGFQGAKGPAGGIPAAYTLIAKSFYESLVRRKQNHRVNFFEYEKPGWTYH 406
            ...|:..||:|.|..|||.||||.||.|||||..|.:.||..:....|..||...||.:.|||:|
  Rat   398 GTRAEYQILLASPEVNGFFGAKGVAGAIPAAYVHIERQFYSEVCSLGQQDRVQLQEYWRRGWTFH 462

  Fly   407 AKGLWYYLPEAILPNLTLIGSSNFGERSVNRDLETQVCLVTANKDLSQRLQAEADRLYDLSQTAE 471
            |||||.||..:.||.||||||.|||.|||:||||.|:.:||.::.|.|:|..|.::||..|....
  Rat   463 AKGLWLYLAGSSLPCLTLIGSPNFGYRSVHRDLEAQIAIVTESRALQQQLHQEQEQLYLRSGVVS 527

  Fly   472 REIVQRP---VPRWVQAVVRIFRNFF 494
            ....::|   |..||:.|..:.:|||
  Rat   528 SATFEQPGRQVKLWVKMVTPLIKNFF 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7718NP_650751.3 PLDc_PGS1_euk_1 61..227 CDD:197233 90/172 (52%)
PLDc_2 75..226 CDD:289836 86/157 (55%)
PLDc_PGS1_euk_2 289..474 CDD:197235 92/184 (50%)
Pgs1XP_006247917.1 PLDc_PGS1_euk_1 93..266 CDD:197233 90/172 (52%)
PLDc_PGS1_euk_2 346..505 CDD:197235 85/159 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166346220
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1502
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5467
Inparanoid 1 1.050 389 1.000 Inparanoid score I1934
OMA 1 1.010 - - QHG55277
OrthoDB 1 1.010 - - D1358866at2759
OrthoFinder 1 1.000 - - FOG0005130
OrthoInspector 1 1.000 - - oto96819
orthoMCL 1 0.900 - - OOG6_102888
Panther 1 1.100 - - LDO PTHR12586
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4150
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.770

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