DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGS1 and pgs1

DIOPT Version :10

Sequence 1:NP_650751.3 Gene:PGS1 / 42254 FlyBaseID:FBgn0038649 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_595992.2 Gene:pgs1 / 2541243 PomBaseID:SPBP18G5.02 Length:502 Species:Schizosaccharomyces pombe


Alignment Length:496 Identity:156/496 - (31%)
Similarity:247/496 - (49%) Gaps:61/496 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 SWLHNLAPCFPLRGDQIQVIHEPKHFYETLVQRIGQAKRRIVLASLYLGTGQLENAMVQTLRHSL 110
            |.:..:.|.|.:..|.|.:||||..||:.|.:.|.:|::||.|::||:  |:.|..::..|.::|
pombe    15 SQIDGVCPKFYVNVDDIDIIHEPPEFYQRLKKLIKKAQKRIFLSTLYI--GKEERELINCLSNAL 77

  Fly   111 EQQSALRLNVLLDFTRGTRGTLN--SKTMLLPLVRDFASQVQLSLYHTPDLRGMTKRLAPPRWNE 173
            ....:|.:::|.|..|.||.:..  |.::|:.|.:.|..:.::.|||||:|||:.|:|.|.|:||
pombe    78 SNNPSLHVHILADQLRCTRESPGCCSASLLMQLKKKFPDRCEIKLYHTPNLRGLRKQLVPHRFNE 142

  Fly   174 LLGLQHMKVYLFDDAVIISGANLSNDYFTNRQDRYILIEDKPLADFYAQFIERVQEFSLAVAP-- 236
            ..||||||:|..||.:||||||||.||||||:|||.|..||.||||:.:......:.|....|  
pombe   143 GWGLQHMKIYGADDNLIISGANLSRDYFTNRKDRYYLFSDKGLADFFFKTHFLFSQLSFECIPHL 207

  Fly   237 -DASEGLHRNWRILPY------------------------------EGTKEQFIQLAR---KRIS 267
             |:|..|.....::|:                              :|.:|:|  |:|   |.:|
pombe   208 SDSSIQLSSTSPVIPFTLKWNNSCPNPLTNPQEFRVAASAKIQQLLQGNREKF--LSRNPSKPLS 270

  Fly   268 DLVQETFQRQARTKEQNP----QADTWIFPLLEMGQI---GIHHDSVVTKRLLSNCLSGSRLK-- 323
            .:.......||......|    :....::||.:...|   .:|........::...||...:.  
pombe   271 SVYGSELINQAGDDNNKPFHKYEESAIVYPLFQCVPILTSDVHSTEEKVLSIIGTLLSRKEVNWT 335

  Fly   324 LATGYFNLTQEYMDTLTHKCLAQCSILMAHPNANGFQGAKGPAGGIPAAYTLIAKSFYESLVRRK 388
            |..||||:.......|. |......:::|...||||..:.||:..||.||..||:.|.:...::|
pombe   336 LTAGYFNVYPALRKQLL-KSEGIGEVIVASQQANGFYRSPGPSKLIPPAYQYIAEQFLKDSRKKK 399

  Fly   389 QNHRVNFFEYEKPGWTYHAKGLWYYLPEAILPNLTLIGSSNFGERSVNRDLETQVCLVTANKDLS 453
            :|  ::..:::..|.||||||.|........|.||.|||||:..||...|||:.:.::|.|:.|.
pombe   400 RN--IDVLQWQNKGNTYHAKGFWLSTQHHKHPFLTTIGSSNYTSRSQQLDLESTLVVMTQNEKLK 462

  Fly   454 QRLQAEADRLYDLSQ---TAEREIVQRPVPRWVQAVVRIFR 491
            ::...|.:.:...::   |.:.|    .||.:|:|:..:.:
pombe   463 RKFSTEIELIKQHTKPMNTCQLE----KVPMYVKALTSLMK 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGS1NP_650751.3 PLDc_PGS1_euk_1 61..227 CDD:197233 76/167 (46%)
PLDc_PGS1_euk_2 289..474 CDD:197235 55/192 (29%)
pgs1NP_595992.2 PLDc_PGS1_euk_1 30..193 CDD:197233 76/164 (46%)
PLDc_PGS1_euk_2 297..484 CDD:197235 55/189 (29%)

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