DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGS1 and Pld2

DIOPT Version :10

Sequence 1:NP_650751.3 Gene:PGS1 / 42254 FlyBaseID:FBgn0038649 Length:494 Species:Drosophila melanogaster
Sequence 2:XP_038941178.1 Gene:Pld2 / 25097 RGDID:3350 Length:972 Species:Rattus norvegicus


Alignment Length:266 Identity:56/266 - (21%)
Similarity:91/266 - (34%) Gaps:77/266 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 IQVIHEPKHFY-------------ETLVQRIGQAKRRIVLASLYLGTGQLENAMVQTLRHSLEQQ 113
            :..|.|.:||.             .|::.::|                   :.:|..:..:.||.
  Rat   666 LHTIRESQHFLYIENQFFISCSDGRTVLNKVG-------------------DEIVDRILKAHEQG 711

  Fly   114 SALRLNVLLDFTRGTRGTL-----NSKTMLLPLVRDFASQVQLSLYHTPDLRGMTKRLAPPRWNE 173
            ...|:.|||....|..|.:     ||...:|........:.:.|:.|      ..|......|.:
  Rat   712 QCFRVYVLLPLLPGFEGDISTGGGNSIQAILHFTYRTLCRGEYSILH------RLKAAMGTAWRD 770

  Fly   174 ---LLGLQ----------------HMKVYLFDD-AVIISGANLSNDYFTNRQDR--YILIEDKPL 216
               :.||:                |.|:.:.|| .|||..||:::.....::|.  .|||||..:
  Rat   771 YMSICGLRTHGELGGHPISELIYIHSKLLIADDRTVIIGSANINDRSLLGKRDSELAILIEDTEM 835

  Fly   217 ADFYAQFIE-RVQEFSLAVAPDA-SEGLHRN-WRILPY-EGTKEQFIQLARKRISDLVQETFQRQ 277
            .......:| :...|:|::.... |..|..| |..|.. :...:.|.|        |.|||.:..
  Rat   836 EPSLMDGVEYQAGRFALSLRKHCFSVILGANTWPDLDLRDPVCDDFFQ--------LWQETAENN 892

  Fly   278 ARTKEQ 283
            |...||
  Rat   893 ATIYEQ 898

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGS1NP_650751.3 PLDc_PGS1_euk_1 61..227 CDD:197233 40/205 (20%)
PLDc_PGS1_euk_2 289..474 CDD:197235
Pld2XP_038941178.1 PLN02866 67..957 CDD:215467 56/266 (21%)
Blue background indicates that the domain is not in the aligned region.

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