DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGS1 and pld-1

DIOPT Version :10

Sequence 1:NP_650751.3 Gene:PGS1 / 42254 FlyBaseID:FBgn0038649 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_494939.1 Gene:pld-1 / 173876 WormBaseID:WBGene00004040 Length:1427 Species:Caenorhabditis elegans


Alignment Length:348 Identity:69/348 - (19%)
Similarity:119/348 - (34%) Gaps:85/348 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 APPRWNELL---------GLQHMKVYLFD-----DAVIISGANL--SNDYFTNRQDRYILIEDKP 215
            |..:|.::|         .|..:::...|     |..|..||.|  ..||.......::.: |.|
 Worm   945 AKRKWKQMLESDEATMGYELDWLRLREMDEKGDGDDEIDGGAKLWYGKDYVNYIAKDFVEV-DMP 1008

  Fly   216 LADFYAQFIER----------VQEFSL-AVAPDASEGLHRNWRILPYEGTKEQFIQLARKRISDL 269
            ..|    ||:|          :...:. |.|.|.:....:.|.....|..|:.      |....|
 Worm  1009 FHD----FIDRGSTPRMPWHDIHSVTFGAPARDLARHFIQRWNATKTEKLKDD------KNYPYL 1063

  Fly   270 VQETFQ-----RQARTKEQNPQADTWIFPLLE--MGQIGIHHDSVVTKRLLSNCLSGSRLKLATG 327
            :.::::     |..:|...:...:..:...|.  .|.|....||:....|.....|...:.:...
 Worm  1064 LPKSYENVRVPRVFKTANASEMVNVQVLRSLSNWSGLINQTEDSIQMAYLSLIANSKHYIYIENQ 1128

  Fly   328 YFNLTQEYMDTLTHKC-LAQCSILMAH------------PNANGFQGAKGPAGG--IPAAYTLIA 377
            :|....|..|.....| :....|:.|:            |...||:|..|..||  :.|......
 Worm  1129 FFVSMIESNDVTNEVCKVIYNRIVRAYKEKDNYRVYIMIPLLPGFEGDVGAPGGSSLQAVLHWTY 1193

  Fly   378 KSFYE---SLVRRKQNHRVNFFEYEKPGWTYHAKGLWYY--LPEAILPNL--------------T 423
            :|..:   ||::|.:....:.|:|      .|...|..|  |.:.::..|              .
 Worm  1194 QSLSQGPNSLIQRLKAVMPDPFKY------IHVGSLRTYDQLGQKLVSELVYIHCKLLIVDDEHV 1252

  Fly   424 LIGSSNFGERSVNRDLETQVCLV 446
            :|||:|..:||...:.:::||.|
 Worm  1253 IIGSANINDRSQCGNRDSEVCCV 1275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGS1NP_650751.3 PLDc_PGS1_euk_1 61..227 CDD:197233 18/85 (21%)
PLDc_PGS1_euk_2 289..474 CDD:197235 41/194 (21%)
pld-1NP_494939.1 PLN02866 158..>681 CDD:215467
PLDc_vPLD1_2_yPLD_like_1 528..674 CDD:197236
PLN02866 <988..1426 CDD:215467 60/305 (20%)
PLDc_vPLD1_2_yPLD_like_2 1101..1278 CDD:197239 39/181 (22%)
Blue background indicates that the domain is not in the aligned region.

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