DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGS1 and pgs1

DIOPT Version :10

Sequence 1:NP_650751.3 Gene:PGS1 / 42254 FlyBaseID:FBgn0038649 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_001121526.2 Gene:pgs1 / 100158650 XenbaseID:XB-GENE-953426 Length:531 Species:Xenopus tropicalis


Alignment Length:497 Identity:227/497 - (45%)
Similarity:305/497 - (61%) Gaps:38/497 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 QQAPSVLATGFPGAPALESLS--------WLHNLAPCFPLRGDQIQVIHEPKHFYETLVQRIGQA 82
            |.||.:.|.    .|||...|        |:.||.|.|.:....::|:..|..|||.:..:|..:
 Frog    45 QSAPQITAK----YPALGCFSPHGTHQFQWIGNLVPEFGISSSNVKVLSTPSEFYEVMKAQIKTS 105

  Fly    83 KRRIVLASLYLGTGQLENAMVQTLRHSLE--QQSALRLNVLLDFTRGTRGTLNSKTMLLPLVRDF 145
            |:||.:||||||.|.||..:|.||..:|:  ..|.|::::|||:|||:||..||:||||||:..|
 Frog   106 KKRITMASLYLGIGPLEQELVNTLEETLKCPDSSELQVSILLDYTRGSRGRKNSRTMLLPLLHRF 170

  Fly   146 ASQVQLSLYHTPDLRGMTKRLAPPRWNELLGLQHMKVYLFDDAVIISGANLSNDYFTNRQDRYIL 210
            ...|::||:|||.|||:.:.|.|.|:||.:||||||:|||||.:|:||||||:.|||||||||:|
 Frog   171 PDNVRVSLFHTPHLRGLLRLLVPERFNETIGLQHMKIYLFDDNIILSGANLSDSYFTNRQDRYVL 235

  Fly   211 IED-KPLADFYAQFIERVQEFSLAVAPD----ASEGLHRNWRILPYEGTKEQFIQLARKRISDLV 270
            .:. ..||||::..:..|.|.||.:.||    ..||:..     ||:|.|.::.:.|.|::.:::
 Frog   236 FQGCSELADFFSDLVGAVSEASLQLQPDDTVQVEEGMEH-----PYQGDKTKYCEAASKKVMEVI 295

  Fly   271 QETFQRQ---ARTKEQNPQA-------DTWIFPLLEMGQIGIHHDSVVTKRLLSNCLSGSRLKLA 325
            ::..:||   ..||.||.::       |||::||::|...||..|.:||:.||:....|.:|.|.
 Frog   296 EDARRRQYEHRSTKFQNERSASDMEPPDTWVYPLVQMKPFGIQIDELVTETLLTEAERGDQLYLT 360

  Fly   326 TGYFNLTQEYMDTLTHKCLAQCSILMAHPNANGFQGAKGPAGGIPAAYTLIAKSFYESLVRRKQN 390
            ||||||||||||.|. ...|..:||:|.|..|||.||||.||.|||||..|...||..:.|..|.
 Frog   361 TGYFNLTQEYMDLLL-GTRADYNILLAAPEVNGFFGAKGIAGAIPAAYVHIEHQFYSEVCRHGQE 424

  Fly   391 HRVNFFEYEKPGWTYHAKGLWYYLPEAILPNLTLIGSSNFGERSVNRDLETQVCLVTANKDLSQR 455
            .||...||.:..||:||||||:|...|.||.|||:||.|||.|||:||||.|:.|||.||:|.|:
 Frog   425 MRVKLREYHRDLWTFHAKGLWFYSAGADLPCLTLVGSPNFGYRSVHRDLEAQIALVTENKELQQQ 489

  Fly   456 LQAEADRLYDLSQTAEREIVQRP---VPRWVQAVVRIFRNFF 494
            |..|..:||:||........|.|   |..||:.|..:.:|||
 Frog   490 LHKEQQQLYNLSNAVSPATFQHPSRYVKLWVKLVTPLIKNFF 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGS1NP_650751.3 PLDc_PGS1_euk_1 61..227 CDD:197233 87/168 (52%)
PLDc_PGS1_euk_2 289..474 CDD:197235 97/184 (53%)
pgs1NP_001121526.2 PLDc_PGS1_euk_1 84..253 CDD:197233 87/168 (52%)
PLDc_PGS1_euk_2 324..485 CDD:197235 88/161 (55%)

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