DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mekk1 and PBS2

DIOPT Version :10

Sequence 1:NP_732373.1 Gene:Mekk1 / 42253 FlyBaseID:FBgn0024329 Length:1571 Species:Drosophila melanogaster
Sequence 2:NP_012407.2 Gene:PBS2 / 853313 SGDID:S000003664 Length:668 Species:Saccharomyces cerevisiae


Alignment Length:700 Identity:166/700 - (23%)
Similarity:268/700 - (38%) Gaps:185/700 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   995 QDKQAVLSRTREILHQGYKFGFEYHKDVIRLFEQKIMDQ-------KDSGAHTVDLALGIIAYAK 1052
            :||.|.||     ||:  |.|    |..|:|.||...|.       ..:.:|..::...:.|..|
Yeast     2 EDKFANLS-----LHE--KTG----KSSIQLNEQTGSDNGSAVKRTSSTSSHYNNINADLHARVK 55

  Fly  1053 MWMHFVMERC--------------ERGRGMRPRWASQ----GLEFLILACDPQITQHLDDDEFEA 1099
            .   |..:|.              ::|....|:...|    .|..|.:|...:::|.:.....:|
Yeast    56 A---FQEQRALKRSASVGSNQSEQDKGSSQSPKHIQQIVNKPLPPLPVAGSSKVSQRMSSQVVQA 117

  Fly  1100 -----LKQQMDRCISHVIGITSEPEKVAKKKASPRT--RKTSSPAT----SRSRTPTRTPMSAGM 1153
                 ||..:|.  .....||.....:...|.:..|  ..|..|||    |.|.|.:.|  ....
Yeast   118 SSKSTLKNVLDN--QETQNITDVNINIDTTKITATTIGVNTGLPATDITPSVSNTASAT--HKAQ 178

  Fly  1154 VLNPNTPPLQSPPYNKLLHPQFSLKEDVSGTSYSPVDSSDYVDTPCQR-SAN-------GELRLL 1210
            :||||....:.|     |..|...:.:|     :|..:...::||.|. ||.       |.:.|.
Yeast   179 LLNPNRRAPRRP-----LSTQHPTRPNV-----APHKAPAIINTPKQSLSARRGLKLPPGGMSLK 233

  Fly  1211 VP--------QTPPTP-------------------ASPGK--SSLESTPLALRQERVRDAVNRLD 1246
            :|        |..|:|                   ::||.  :.::||..:...|...|.|....
Yeast   234 MPTKTAQQPQQFAPSPSNKKHIETLSNSKVVEGKRSNPGSLINGVQSTSTSSSTEGPHDTVGTTP 298

  Fly  1247 --------------------------MDLEDGLRERRLIGQVKSLNSSDKVHIRARSVHFRWHRG 1285
                                      :|::.|           |||.:.|:.:.::.:.|.....
Yeast   299 RTGNSNNSSNSGSSGGGGLFANFSKYVDIKSG-----------SLNFAGKLSLSSKGIDFSNGSS 352

  Fly  1286 IKI-----------GQGRFGKVYTAVNNNTGELMAMKEIAIQPGETRALKNVAEELKILEGIKHK 1339
            .:|           |.|.:|.|...::..|..:||.||:.::..|.: .:.:..||::|......
Yeast   353 SRITLDELEFLDELGHGNYGNVSKVLHKPTNVIMATKEVRLELDEAK-FRQILMELEVLHKCNSP 416

  Fly  1340 NLVRYYGIEVHREELLIFMELCSEGTLESLVELT---GNLPEALTRRFTAQLLSGVSEL-HKHGI 1400
            .:|.:||.......:.:.||....|:|:.:.:.:   |.:.|.........::.|:.|| .:|.|
Yeast   417 YIVDFYGAFFIEGAVYMCMEYMDGGSLDKIYDESSEIGGIDEPQLAFIANAVIHGLKELKEQHNI 481

  Fly  1401 VHRDIKTANIFLVDGSNSLKLGDFGSAVKIQAHTTVPGEL-----QGYVGTQAYMAPEVFTKTNS 1460
            :|||:|..||.......::||.|||          |.|.|     :..:|.|:|||||.....|.
Yeast   482 IHRDVKPTNILCSANQGTVKLCDFG----------VSGNLVASLAKTNIGCQSYMAPERIKSLNP 536

  Fly  1461 DGHGRA-----ADIWSVGCVVVEMASGKRPW--AQFDSNFQIMFKVGMGEKPQAP-ESLSQEGHD 1517
            |   ||     :||||:|..::|||.|:.|:  ..:|:.|..:..:..|..|:.| :..|.:..|
Yeast   537 D---RATYTVQSDIWSLGLSILEMALGRYPYPPETYDNIFSQLSAIVDGPPPRLPSDKFSSDAQD 598

  Fly  1518 FIDHCLQHDPKRRLTAVELLEHNF-CKY-GRDECSSEQLQMQVRGSFRRN 1565
            |:..|||..|:||.|...|.||.: .|| .:|...||.:..::.   |||
Yeast   599 FVSLCLQKIPERRPTYAALTEHPWLVKYRNQDVHMSEYITERLE---RRN 645

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mekk1NP_732373.1 MEKK4_N 105..>930 CDD:466077
STKc_MEKK4 1281..1542 CDD:270796 81/289 (28%)
PBS2NP_012407.2 PKc_PBS2_like 358..644 CDD:132953 85/302 (28%)
Blue background indicates that the domain is not in the aligned region.

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