DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mekk1 and pak6b

DIOPT Version :10

Sequence 1:NP_732373.1 Gene:Mekk1 / 42253 FlyBaseID:FBgn0024329 Length:1571 Species:Drosophila melanogaster
Sequence 2:NP_001155959.1 Gene:pak6b / 567874 ZFINID:ZDB-GENE-041014-121 Length:607 Species:Danio rerio


Alignment Length:528 Identity:140/528 - (26%)
Similarity:224/528 - (42%) Gaps:107/528 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly  1096 EFEALKQQMDRCISHVIGITSEPEKVAKKKASPRTRKTSSPATSRS------------------- 1141
            |:|.|.....|       .:|:..:.::...||:|....|||.:||                   
Zfish   129 EYEELNNTNHR-------NSSDLHRGSRPIQSPQTESRQSPARARSVHEATMFTGLMPRDILLHR 186

  Fly  1142 ----------RTPTRTPMSA------GMVLNPNTPPLQS-----PPYN-KLLHPQFSLKEDVSGT 1184
                      ..|.:.|:|.      |..||.:...:::     ..|: |:..|........:||
Zfish   187 AGCEGTDNAGNKPNQRPVSCLYSQSDGAKLNSDQLKMETQRRPQSTYDFKVNSPNLPAASKPNGT 251

  Fly  1185 SYSPVDSSDYV--DTPCQRSANGELRLL-----VPQTPPTPASP-----GKSSLESTPLALRQER 1237
            | ||......:  .||.:.|.:..|:|.     ||....:|:.|     |.||...|..::...:
Zfish   252 S-SPKPGHGIISMQTPRRSSTDNTLKLSTIPADVPPAQDSPSEPRQAPSGASSPGLTEPSVTHTQ 315

  Fly  1238 VRDAVNRLDMDLEDGLRERRLIGQVKSLNSSDKVHIRARSVHFRWHRGIKIGQGRFGKVYTAVNN 1302
            .|.|   |.|.::.|                   ..|:...:|     ||||:|..|.|..|...
Zfish   316 FRAA---LQMVVDPG-------------------DPRSYLENF-----IKIGEGSTGVVCIAREK 353

  Fly  1303 NTGELMAMKEIAIQPGETRALKNVAEELKILEGIKHKNLVRYYGIEVHREELLIFMELCSEGTLE 1367
            ::|..:|:|.:.::..:.|.|  :..|:.|:...:|:|:|..|...:..|||.:.||....|.|.
Zfish   354 HSGRQVAVKMMDLRKQQRREL--LFNEVVIMRDYRHQNVVEMYKSALVGEELWVIMEYLQGGALT 416

  Fly  1368 SLVELTGNLPEALTRRFTAQLLSGVSELHKHGIVHRDIKTANIFL-VDGSNSLKLGDFGSAVKIQ 1431
            ::|..| .|.|.........:|..:..||..|::|||||:.:|.| :||  .:||.|||...:|.
Zfish   417 NIVSET-RLTEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDG--RVKLSDFGFCAQIS 478

  Fly  1432 AHTTVPGELQGYVGTQAYMAPEVFTKTNSDGHGRAADIWSVGCVVVEMASGKRPWAQFDSNFQIM 1496
              ..|| :.:..|||..:|||||.:||   .:|...||||:|.:||||..|:.|:.. ::....|
Zfish   479 --KDVP-KRRSLVGTPYWMAPEVVSKT---PYGTEVDIWSLGIMVVEMVDGEPPYFS-ETPISAM 536

  Fly  1497 FKVGMGEKPQA--PESLSQEGHDFIDHCLQHDPKRRLTAVELLEHNFCKYGRDECSSEQLQMQVR 1559
            .::.....|.|  ...:|....||:|..|..:|::|.:|.:||:|.|..    :|||.:..:.:.
Zfish   537 KRLRDEPPPTARNASKISPVLRDFLDSMLTREPQQRSSASDLLQHPFLL----QCSSPRCLIPLV 597

  Fly  1560 GSFRRNVA 1567
            ...||..:
Zfish   598 EQTRRRTS 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mekk1NP_732373.1 MEKK4_N 105..>930 CDD:466077
STKc_MEKK4 1281..1542 CDD:270796 87/263 (33%)
pak6bNP_001155959.1 PBD 13..65 CDD:395634
STKc_PAK6 311..607 CDD:270821 100/338 (30%)
Blue background indicates that the domain is not in the aligned region.

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