DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mekk1 and pak2a

DIOPT Version :9

Sequence 1:NP_732373.1 Gene:Mekk1 / 42253 FlyBaseID:FBgn0024329 Length:1571 Species:Drosophila melanogaster
Sequence 2:NP_001002717.1 Gene:pak2a / 266749 ZFINID:ZDB-GENE-021011-2 Length:517 Species:Danio rerio


Alignment Length:501 Identity:127/501 - (25%)
Similarity:219/501 - (43%) Gaps:84/501 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly  1085 DPQITQHLDDD----EFEALKQQMDRCISHVIGITSEPEKVAKKK-------------ASPRTRK 1132
            |.:.|.|:..|    ||..:.:|..|.:.     ||...|..:||             ::..:|:
Zfish    80 DFEHTIHVGFDSVTGEFTGMPEQWARLLQ-----TSNITKSEQKKNPQAVLDVLKFYDSTGNSRQ 139

  Fly  1133 TSSPATSRSRTPTRTPMSAGMVLNPNTPPLQSPPYNKLLHPQFSLKEDVSGTSYSPVDSSDYVDT 1197
            .....|.:.....:.......|.:|:.....:||......||.:    :|..:.|.:|       
Zfish   140 KYLSFTDKDAPQAKKGSEQSPVKDPDDDDEDAPPPVVAPRPQHT----ISVYTRSVID------- 193

  Fly  1198 PCQRSANGELRLLVPQTPPTPASPGKSSLESTPLALRQERVRDAVNRLDMDLEDGLRERRLIGQV 1262
                              |.||....:..:.:..|.:|::.:..:.  |.::.:.||....||..
Zfish   194 ------------------PIPAPAAIADTDGSKAADKQKKGKGKMT--DEEIMEKLRTIVSIGDP 238

  Fly  1263 KSLNSSDKVHIRARSVHFRWHRGIKIGQGRFGKVYTAVNNNTGELMAMKEIAIQPGETRALKNVA 1327
            |.                ::.|..|||||..|.||||::..||:.:|:|:|.:|....:.|  :.
Zfish   239 KK----------------KYTRYEKIGQGASGTVYTAIDVATGQEVAIKQINLQKQPKKEL--II 285

  Fly  1328 EELKILEGIKHKNLVRYYGIEVHREELLIFMELCSEGTLESLVELTGNLPEALTRRFTAQLLSGV 1392
            .|:.:::.:|:.|:|.:....:..:||.:.||..:.|:|..:|..| .:.||.......:.|..:
Zfish   286 NEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTET-CMDEAQIAAVCRECLQAL 349

  Fly  1393 SELHKHGIVHRDIKTANIFL-VDGSNSLKLGDFGSAVKIQAHTTVPGELQGYVGTQAYMAPEVFT 1456
            ..||.:.::|||||:.|:.| :||  |:||.|||...:|   |....:....|||..:|||||.|
Zfish   350 EFLHANQVIHRDIKSDNVLLGMDG--SVKLTDFGFCAQI---TPEQSKRSTMVGTPYWMAPEVVT 409

  Fly  1457 KTNSDGHGRAADIWSVGCVVVEMASGKRPWAQFDSNFQIMFKVGMGEKP--QAPESLSQEGHDFI 1519
            :   ..:|...||||:|.:.:||..|:.|:.. ::..:.::.:.....|  |.||.||....||:
Zfish   410 R---KAYGPKVDIWSLGIMAIEMVEGEPPYLN-ENPLRALYLIATNGTPELQNPEKLSPIFRDFL 470

  Fly  1520 DHCLQHDPKRRLTAVELLEHNFCKYGRDECSSEQLQMQVRGSFRRN 1565
            :.||:.|.::|....|||:|.|.|..:...|...|.:..:.:.:.|
Zfish   471 NRCLEMDVEKRGGGKELLQHPFLKLAKPLSSLTPLILAAKEAMKSN 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mekk1NP_732373.1 STKc_MEKK4 1281..1542 CDD:270796 87/263 (33%)
S_TKc 1282..1541 CDD:214567 87/261 (33%)
pak2aNP_001002717.1 PBD 74..129 CDD:279166 13/53 (25%)
STKc_PAK2 222..517 CDD:132986 98/323 (30%)
S_TKc 242..493 CDD:214567 87/262 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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