DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mekk1 and pak-1

DIOPT Version :10

Sequence 1:NP_732373.1 Gene:Mekk1 / 42253 FlyBaseID:FBgn0024329 Length:1571 Species:Drosophila melanogaster
Sequence 2:NP_001024377.1 Gene:pak-1 / 180873 WormBaseID:WBGene00003911 Length:572 Species:Caenorhabditis elegans


Alignment Length:587 Identity:137/587 - (23%)
Similarity:249/587 - (42%) Gaps:104/587 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly  1019 HKDVIRLFEQKIMDQKDSGAHTVDLALGIIAYAKMWMHFVMERCERGRGMRPRWASQGLEFLILA 1083
            :||.....|:.::.:..:..||:.     :.|......|.        ||...||.       |.
 Worm    55 NKDKKEASEKPVISRPSNFEHTIH-----VGYDPKTGEFT--------GMPEAWAR-------LL 99

  Fly  1084 CDPQITQHLDDDEFEALKQQMDRCISHVIGITSEPEKVAKKKASPRTRKTSSPATSRSRTPTRTP 1148
            .|.||::.        .:||..:.:...:...::.|...:|...........       .|:|||
 Worm   100 TDSQISKQ--------EQQQNPQAVLDALKYYTQGESSGQKWLQYDMMFIDD-------APSRTP 149

  Fly  1149 MSAGMVLNPNTPPLQSPPY--NKLLHPQFSLKEDVSGTSYSPVDSSDYVDTPCQRSANGELRLLV 1211
             |.|  |.|......|.||  ||:..|: .:....:.||.:..:|...| .|...|.|.....:.
 Worm   150 -SYG--LKPQPYSTSSLPYHGNKIQDPR-KMNPMTTSTSSAGYNSKQGV-PPTTFSVNENRSSMP 209

  Fly  1212 PQTPPTPASPGKSSLESTPLAL----------------RQERVRD------AVNRLDMDLEDGLR 1254
            |...|.|...|::..:..|.|:                .:|::.|      .|.......:..:.
 Worm   210 PSYAPPPVPHGETPADIVPPAIPDRPARTLSIYTKPKEEEEKIPDLSKGQFGVQARGQKAKKKMT 274

  Fly  1255 ERRLIGQVKSLNSSDKVHIRARSVHFRWHRGIKIGQGRFGKVYTAVNNNTGELMAMKEIAIQPGE 1319
            :..::.:::::.|......:.|.|.       |||.|..|.||||:..:|...:|:|::.::...
 Worm   275 DAEVLTKLRTIVSIGNPDRKYRKVD-------KIGSGASGSVYTAIEISTEAEVAIKQMNLKDQP 332

  Fly  1320 TRALKNVAEELKILEGIKHKNLVRYYGIEVHREELLIFMELCSEGTLESLV---ELTGNLPEALT 1381
            .:.|  :..|:.::...||.|:|.|....:..:||.:.||..:.|:|..:|   ::...:..|:.
 Worm   333 KKEL--IINEILVMRENKHANIVNYLDSYLVCDELWVVMEYLAGGSLTDVVTECQMEDGIIAAVC 395

  Fly  1382 RRFTAQLLSGVSELHKHGIVHRDIKTANIFL-VDGSNSLKLGDFGSAVKI----QAHTTVPGELQ 1441
            |    ::|..:..||...::|||||:.||.| :||  |:||.|||...::    :..||:     
 Worm   396 R----EVLQALEFLHSRHVIHRDIKSDNILLGMDG--SVKLTDFGFCAQLSPEQRKRTTM----- 449

  Fly  1442 GYVGTQAYMAPEVFTKTNSDGHGRAADIWSVGCVVVEMASGKRPWAQFDSNFQIMFKVGMGEKPQ 1506
              |||..:|||||.|:..   :|...|:||:|.:.:||..|:.|:.. ::..:.::.:....||.
 Worm   450 --VGTPYWMAPEVVTRKQ---YGPKVDVWSLGIMAIEMVEGEPPYLN-ENPLRAIYLIATNGKPD 508

  Fly  1507 AP--ESLSQEGHDFIDHCLQHDPKRRLTAVELLEHNFCKYGRDECSSEQLQMQVRGSFRRNVATS 1569
            .|  :|::....||:|..|:...:.|.:|.:||.|.|.:..:...|...|.:    :.::::|.:
 Worm   509 FPGRDSMTLLFKDFVDSALEVQVENRWSASQLLTHPFLRCAKPLASLYYLIV----AAKKSIAEA 569

  Fly  1570 SS 1571
            |:
 Worm   570 SN 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mekk1NP_732373.1 MEKK4_N 105..>930 CDD:466077
STKc_MEKK4 1281..1542 CDD:270796 80/270 (30%)
pak-1NP_001024377.1 PBD 67..123 CDD:395634 14/83 (17%)
Protein Kinases, catalytic domain 287..547 CDD:473864 84/285 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.