DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ChAT and YAT1

DIOPT Version :9

Sequence 1:NP_477004.5 Gene:ChAT / 42249 FlyBaseID:FBgn0000303 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_009420.1 Gene:YAT1 / 851285 SGDID:S000000080 Length:687 Species:Saccharomyces cerevisiae


Alignment Length:702 Identity:182/702 - (25%)
Similarity:290/702 - (41%) Gaps:143/702 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 LPKVPVPALDETMADYIRALEPITTPAQLERTKELIRQFSAPQGIGA--RLHQYLL--DKREAED 148
            |.::|:|.|.:|:..|:..:||:....|..||:   |...:.:.:.|  .||:.||  |.|.||.
Yeast     4 LKRLPIPPLQDTLNRYLARVEPLQDERQNRRTR---RTVLSAENLDALNTLHERLLEYDARLAES 65

  Fly   149 N----WAYYYWLNEMYMDIRIPLPINSNPGMVFPPRRFKTVHDV----------AHF-----AAR 194
            |    :...:|. :.|:.....:.:|.||  .|..:...|:.|.          ||.     |||
Yeast    66 NPESSYIEQFWY-DAYLLYDATVVLNVNP--YFQLQDDPTIKDTPETAAQGPYGAHTVQVRRAAR 127

  Fly   195 LLDGILSHREMLDSGELPLERAASREKNQPLCMAQYYRLLGSCR-RPGVKQDSQFLPSRERLNDE 258
            |...||.....:..|.|   |..:.....||.|.||.||.||.| .||..:.|..|    :.:..
Yeast   128 LTTSILKFIRQIRHGTL---RTDTVRGKTPLSMDQYERLFGSSRIPPGPGEPSCHL----QTDAT 185

  Fly   259 DRHVVVICRNQMYCV-VLQASDRGKLSESEIASQILY-VLSDAPCLPAKPVPVGLLTAEPRSTWA 321
            ..|||.:.|.|.|.. ||...:....:..|.....|| ::.||....:...|.|:.|.|.|..|:
Yeast   186 SHHVVAMYRGQFYWFDVLDTRNEPIFATPEQLEWNLYSIIMDAESAGSGSAPFGVFTTESRRVWS 250

  Fly   322 RDREML--QEDERNQRNLELIETAQVVLCLDEPLAGNFNARGFTGATPTVHRAGDRDETNMAHEM 384
            ..|:.|  .:|..|.|||:||::|..|:|||:                ....|..:||  :...|
Yeast   251 NIRDYLFHADDCTNWRNLKLIDSALFVVCLDD----------------VAFAADQQDE--LTRSM 297

  Fly   385 IHGGGS------------EYNSG---NRWFDKTMQLIICTDGTWGLCYEHSCSEGIAVVQLLEKI 434
            :.|..:            ...:|   |||:|| :|||:..:|..|:.:||:..:|..|::|...|
Yeast   298 LCGTSTINLDPHQHQPPLNVQTGTCLNRWYDK-LQLIVTKNGKAGINFEHTGVDGHTVLRLATDI 361

  Fly   435 Y------------KKIEEHPDEDNGLPQ-----------HHLPPPERLEWHVGPQLQLRFAQASK 476
            |            |.:.:...:|:|.|.           :.:..|.:|||.....||.....|..
Yeast   362 YTDSILSFARGVTKNVVDIFSDDDGKPSSSSLASAAHSANLITIPRKLEWRTDNFLQSSLHFAET 426

  Fly   477 SVDKCIDDLDFYVYRYQSYGKTFIKSC-QVSPDVYIQLALQLAHYKLYGRLVATYESASTRRFLH 540
            .:...|...:|....:.:||.:.||:. :.|||.::|...|:|::.||||....||.|.|:.|.:
Yeast   427 RISDLISQYEFVNLDFSNYGASHIKTVFKCSPDAFVQQVFQVAYFALYGRFETVYEPAMTKAFQN 491

  Fly   541 GRVDCIRAASTEALEWAKAMCQGEGANVPLESDREDEEESRKVKFSIYSKDHLRELFRCAVARQT 605
            ||.:.||:.:.::..:.|::..            :|..::.|:           :|...|....:
Yeast   492 GRTEAIRSVTGQSKLFVKSLLD------------QDASDATKI-----------QLLHDACTAHS 533

  Fly   606 EVMVKNILGNGIDIPLLGL--------REASIEVTGEMHELFKDESYIISQCFLLSTSQVACSTD 662
            ::..:...|.|.|..|..|        ::..     |:..:|:|:|:...|..:||||.......
Yeast   534 QITRECSQGLGQDRHLYALYCLWNQWYKDKL-----ELPPIFRDKSWTTMQNNVLSTSNCGNPCL 593

  Fly   663 SFMGYGPVTPRGYGCSY--NPHPEQIVFCVSAFYSCEDTSASRYAKSLQDSL 712
            ...|:||||..|:|..|  ..|      .||...|......:|:|..::.||
Yeast   594 KSFGFGPVTANGFGIGYIIRDH------SVSVVVSSRHRQTARFASLMEKSL 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChATNP_477004.5 Carn_acyltransf 88..716 CDD:279140 182/702 (26%)
YAT1NP_009420.1 Carn_acyltransf 4..642 CDD:395612 182/702 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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