DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ChAT and crot

DIOPT Version :10

Sequence 1:NP_477004.5 Gene:ChAT / 42249 FlyBaseID:FBgn0000303 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001018161.1 Gene:crot / 553204 ZFINID:ZDB-GENE-050522-35 Length:612 Species:Danio rerio


Alignment Length:676 Identity:196/676 - (28%)
Similarity:318/676 - (47%) Gaps:114/676 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 STAESVDEFGFPDTLPKVPVPALDETMADYIRALEPITTPAQLERTKELIRQFSAPQGIGARLHQ 138
            |:||..  |.:..:||.:|||||.:|::.|:.|::|..:..:...|..::::|.  :|||..|||
Zfish     8 SSAERT--FQYQRSLPPLPVPALRDTLSKYLDAVKPFASEEEFGATVAIVKRFE--EGIGQELHQ 68

  Fly   139 YLLDKREAEDNWAYYYWLNEMYMDIRIPLPINSNPG-------MVFPPR---RFKTVHDVAHFAA 193
            .||.:.:::.||...:||:..|:::|||..:|.|.|       ..:||:   :.:....|.....
Zfish    69 KLLQRAKSKRNWLEEWWLDTAYLEVRIPSQLNVNFGGPTAYLEHCWPPQEGTQLERTSMVLWLTF 133

  Fly   194 RLLDGILSHREMLDSGELPLERAASREKNQPLCMAQYYRLLGSCRRPGVKQDS--QFLPSRERLN 256
            :..|.|.:.|       |.:.:|.:    .|..|.|:..|..:|:.||:.:|:  .|..: |...
Zfish   134 QCWDLIRTER-------LAIHKAGT----IPFDMDQFRMLFCTCKVPGITKDTILNFFKT-ESEG 186

  Fly   257 DEDRHVVVICRNQMYCVVLQASDRGK-LSESEIASQILYVLSDAPCLPAKPVPVGL--LTAEPRS 318
            ....||:|:||.:::  ...|...|: |:..|:..|:.|:.:   |...:|...|:  ||.|.|:
Zfish   187 PCPSHVIVMCRGRIF--TFDALCDGRILTPPELLRQLTYIKN---CCDGEPEGDGVSALTTEERT 246

  Fly   319 TWARDRE-MLQEDERNQRNLELIETAQVVLCLDEPLAGNFNARGFTGATPTVHRAGDRDETNMAH 382
            .||:.|| ::..|..|:..||.|::|..|:.||:       |:.:  |||.       :.|.:..
Zfish   247 RWAKAREYLISMDPVNKTILETIQSALFVVGLDD-------AKPY--ATPD-------NYTQLTD 295

  Fly   383 EMIHGGGSEYNSGNRWFDKTMQLIICTDGTWGLCYEHS-------CSEGIAVVQLLEK---IYKK 437
            ..:.|     :..|||.||:..|:..::|.:....:|:       .|.|..|.|.|:.   ::|.
Zfish   296 LALTG-----DPTNRWGDKSYNLVCYSNGIFSSNCDHAPYDAMVLVSNGYYVDQKLKACGGVWKG 355

  Fly   438 IEEHPDEDNGLPQHHLPPPERLEWHVGPQLQLRFAQASKSVDKCIDDLDFYVYRYQSYGKTFIKS 502
            :|         ....:|.||.|.:.|..:::...|.|.:...|...||....|.:.|:|||.||.
Zfish   356 LE---------VVRQMPVPEELIFTVDERVRRDIALAKEQYSKSCQDLQVVSYAFTSFGKTAIKK 411

  Fly   503 CQVSPDVYIQLALQLAHYKLYGRLVATYESASTRRFLHGRVDCIRAASTEALEWAKAMCQGEGAN 567
            .::.||.::|||||||:|:.:|:....||:|:||||.|||.:.:|..:.||..|.:.|..     
Zfish   412 RKLHPDTFVQLALQLAYYRQHGQPGCCYETATTRRFFHGRTETMRPCTMEAQHWCRTMMN----- 471

  Fly   568 VPLESDREDEEESRKVKFSIYSKDHLRELFRCAVARQTEVMVKNILGNGIDIPLLGL----REAS 628
             |..:..|.                 |.....||.:..::|.:...|.|||..||||    :|.|
Zfish   472 -PAATTEEK-----------------RHTLHAAVNKHNKLMAEAQDGKGIDRHLLGLYLIAKENS 518

  Fly   629 IEVTGEMHELFKDESYIIS---QCFLLSTSQVACSTDSFMG-YGPVTPRGYGCSYNPHPEQIVFC 689
            |.|.    ||:.|..|..|   ..|:||||.|..:|  .:| ..|:.|.|||..|....::||..
Zfish   519 IPVP----ELYADPLYTKSGGGGNFVLSTSLVGYTT--VLGAVAPMVPHGYGFFYRIRDDRIVAS 577

  Fly   690 VSAFYSCEDTSASRYAKSLQDSLDIM 715
            .:|:.|..:|.|....::|..||..|
Zfish   578 CTAWKSNPETDAETLFQNLATSLHEM 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChATNP_477004.5 Carn_acyltransf 92..710 CDD:459926 187/651 (29%)
crotNP_001018161.1 Carn_acyltransf 23..596 CDD:459926 186/650 (29%)

Return to query results.
Submit another query.