DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ChAT and cratb

DIOPT Version :9

Sequence 1:NP_477004.5 Gene:ChAT / 42249 FlyBaseID:FBgn0000303 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001004594.2 Gene:cratb / 447855 ZFINID:ZDB-GENE-040912-162 Length:614 Species:Danio rerio


Alignment Length:637 Identity:210/637 - (32%)
Similarity:345/637 - (54%) Gaps:54/637 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 TLPKVPVPALDETMADYIRALEPITTPAQLERTKELIRQFSAPQGIGARLHQYLLDKREAEDNWA 151
            ::|..|||.|.:|:..|:.||||:....:||.|:.::::|....|:|..|.:.|:.:.:...||.
Zfish    26 SVPYQPVPPLGQTLQRYLAALEPLLPEDELEHTRRIVQEFGCAGGLGESLQRELIKRAKHSHNWI 90

  Fly   152 YYYWLNEMYMDIRIPLPINSNPGMVFPPRRFKTVHDVAHFAARLLDGILSHREMLDSGELPLERA 216
            ..:|:...|::.|.||.::|||.:..|.|.|........||::|:.|:|:.:..:|||.|.:|..
Zfish    91 SDWWVQWAYLECRQPLAVHSNPAISLPKRDFTDWRGQLVFASKLIAGVLNFKAEVDSGRLAIEYM 155

  Fly   217 ASREKNQPLCMAQYYRLLGSCRRPGVKQDSQFLPSRERLNDEDRHVVVICRNQMYCVVLQASDRG 281
                :..||||..:.:|..|||.||.|.|......|.|..  ..|:.|:...|.:.:.:..||..
Zfish   156 ----RGNPLCMELFPKLFSSCRIPGPKHDLVVHYGRPRRG--PAHITVVRNYQFFQLDVYNSDGT 214

  Fly   282 KLSESEIASQILYVLSDAPCLPAKPVPVGLLTAEPRSTWARDREMLQEDERNQRNLELIETAQVV 346
            .|:||:|.:|:|.:.|.:  ......|:|:||:|.|.||.:....|..|:.|:.::.|||.:...
Zfish   215 PLTESQIHAQLLRIRSQS--WKTDKEPMGILTSEHRHTWGQAYTRLLRDKINKESVRLIEKSLFT 277

  Fly   347 LCLDEPLAGNFNARGFTGATPTVHRAGDRD-ETNMAHEMIHGGGSEYNSGNRWFDKTMQLIICTD 410
            ||||.|                |.|..|.: .:.||.:::||||:..||||||||||:|.::..|
Zfish   278 LCLDSP----------------VMRISDENYSSRMAAQILHGGGTYSNSGNRWFDKTLQFVVGED 326

  Fly   411 GTWGLCYEHSCSEGIAVVQLLEKI--YKKIEEHPDEDNGLPQHHLPPPERLEWHVGPQLQLRFAQ 473
            |:|||.|||:.:||..:..||:.:  |.|:    .:....|...||.|::|.:::..:::.....
Zfish   327 GSWGLLYEHATAEGPPIATLLDHVLEYCKM----TDSVRAPLIPLPMPKKLYFYINSEIKWDLEM 387

  Fly   474 ASKSVDKCIDDLDFYVYRYQSYGKTFIKSCQVSPDVYIQLALQLAHYKLYGRLVATYESASTRRF 538
            |.:::|..|:|||...:.:|.:||.|:|..::||:.::|||:|||:|:::..:.|..:.||.|.|
Zfish   388 AKQNLDILINDLDIKCFNFQCFGKKFVKQLKLSPNSFVQLAIQLAYYRVHNEVCAACDIASLRMF 452

  Fly   539 LHGRVDCIRAASTEALEWAKAMCQGEGANVPLESDREDEEESRKVKFSIYSKDHLRELFRCAVAR 603
            ..||.|.||:.:.:.|.:.:|.              :|...||:.|.         :|.|.||..
Zfish   453 RGGRTDYIRSPTNQMLSFIQAF--------------DDVAVSREAKI---------QLLREAVNA 494

  Fly   604 QTEVMVKNILGNGIDIPLLGLREASIEVTGEMHELFKDESYIISQCFLLSTSQVACSTDSFMGYG 668
            .:.:..::::|.|||..||||:..:||....:..:|.|.:|.::..:.|.|.||..:|||.|.:|
Zfish   495 YSLLTEQSLMGQGIDRHLLGLKLQAIENGLSVPRIFMDTAYGLATHWKLRTGQVPTNTDSVMCFG 559

  Fly   669 PVTPRGYGCSYNPHPEQIVFCVSAFYSCEDTSASRYAKSLQDSLDIMRDLLQ 720
            |:.|.||...|||..:.:.|.|:||..||||:|.:.|.:|:.||..:::|.|
Zfish   560 PLVPDGYAVCYNPQQDHLHFSVTAFNCCEDTNAEKLALTLERSLRDVQELFQ 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChATNP_477004.5 Carn_acyltransf 88..716 CDD:279140 208/630 (33%)
cratbNP_001004594.2 Carn_acyltransf 28..607 CDD:279140 208/629 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D167256at33208
OrthoFinder 1 1.000 - - FOG0001049
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X630
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.920

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