DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ChAT and CPT2

DIOPT Version :10

Sequence 1:NP_477004.5 Gene:ChAT / 42249 FlyBaseID:FBgn0000303 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_647756.1 Gene:CPT2 / 38355 FlyBaseID:FBgn0035383 Length:667 Species:Drosophila melanogaster


Alignment Length:715 Identity:182/715 - (25%)
Similarity:307/715 - (42%) Gaps:132/715 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 WLSTAES-----------------VDEFGFPDTLPKVPVPALDETMADYIRALEPITTPAQLERT 119
            |:||..|                 :....|..:||::|:|.|:.:...::.|.:|:.:||:..:|
  Fly    12 WISTNSSRTTTTHGQHYQYLQCSKLPTLYFQRSLPRLPIPLLENSCRRFLEATKPLLSPAEQAQT 76

  Fly   120 KELIRQFSAPQGIGARLHQYLLDKREAEDNWAYYY---WLNEMYMDIRIPLPINSNPGMVF---- 177
            ::.:.||.  ||||..||. .|...:||:....|.   |. :||:..|.|||:|.||.:|.    
  Fly    77 QQTVEQFR--QGIGMELHA-KLKSHDAENKHTSYISQPWF-DMYLADRAPLPLNYNPLLVMKSDA 137

  Fly   178 -PPRRFKTVH----------------------DVAHFAARLLDGILSHREMLDSGELPLERAASR 219
             |..:.:.|.                      :|.|..|:..|.....|.|..:.:.....|:..
  Fly   138 RPEYQQQVVRATNLIISSLRFWRSLQADLLEPEVYHMNAKKSDTSSYRRWMKVAPKAFATYASYA 202

  Fly   220 EKNQPLCMAQYYRLLGSCRRPGVKQDSQFLPSRERLNDED-RHVVVICRNQMYCV-VLQASDRGK 282
            .|..||.|:||.||.|:.|.|.:.:|       |.:...| :|::|:.|..||.| ||.:|  |.
  Fly   203 FKAFPLDMSQYNRLFGTSRIPRIGKD-------ELVQSPDAKHILVMRRGHMYAVNVLDSS--GY 258

  Fly   283 L-SESEIASQILYVLSDAPCLPAKPVPVGLLTAEPRSTWARDREMLQEDERNQRNLEL-IETAQV 345
            : |.|.|..::..||.......|..||:|:||:..|..||:.|:....:.:|...||. ::.|..
  Fly   259 IESPSVILGRLRAVLKLDADREAASVPLGVLTSGQRDEWAKTRQHFVSNTKNADLLEREVDAALF 323

  Fly   346 VLCLDEPLAGNFNARGFTGATPTVHRAGDRDETNMAHEMIHGGGSEYNSGNRWFDKTMQLIICTD 410
            .:|||....|.||.              ::.|..:.| ::.|     .:.||||||::.|:|..|
  Fly   324 CVCLDGEEDGVFNE--------------NQQEPLLKH-LLAG-----KAQNRWFDKSISLLISAD 368

  Fly   411 GTWGLCYEHSCSEGIAVVQLLEKIYKKIEEHP-------------DEDNGLPQHHLPPPERLEWH 462
            ||..:.:|||..:|:||::...::||...:.|             |..|..|         :.:.
  Fly   369 GTTAINFEHSWGDGVAVLRYFNELYKDTLKQPFVSTETVHTPAEGDFSNVRP---------INFE 424

  Fly   463 VGPQLQLRFAQASKSVDKCIDDLDFYVYRYQSYGKTFIKSCQVSPDVYIQLALQLAHYKLYGRLV 527
            :....:...::|.......:|:||..|.:|....|...|...:|||..|||:.|||:.:.|...|
  Fly   425 IDDATKSAVSEAYNKNASIVDNLDMNVLKYPHINKPTCKQYGLSPDSIIQLSFQLAYRQAYSGYV 489

  Fly   528 ATYESASTRRFLHGRVDCIRAASTEALEWAKAMCQGEGANVPLESDREDEEESRKVKFSIYSKDH 592
            .:|||.||..|.|||.:.:|..:....::.:|:.|.|.:..                    |...
  Fly   490 GSYESCSTSAFRHGRTETMRPCTNATRDFCEAILQPERSKP--------------------SAGE 534

  Fly   593 LRELFRCAVARQTEVMVKNILGNGIDIPLLGLREASIEVTGEMHELFKDESYIISQCFLLSTSQV 657
            ||.:.........::..:..:|.|.|..|..||..:.:....:.:|::.|:|......::|||.:
  Fly   535 LRAMIDNCSKVHGQLTKEAAMGQGFDRHLFALRHTAQKEGIPIPDLYETEAYKRINNNIISTSTL 599

  Fly   658 ACSTDSFM--GYGPVTPRGYGCSYNPHPEQIVFCVSAFYSCEDTSASRYAKSLQDSLDIMRDLLQ 720
              .:|:.:  .:|||...|:|..|:...:.....|:.:.:..|...  :..||:.:.|.:..::|
  Fly   600 --GSDALLAGSFGPVVKNGFGIGYSIQNDFAGAIVTTYKNQADGKV--FIDSLESAFDKICAVIQ 660

  Fly   721  720
              Fly   661  660

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChATNP_477004.5 Carn_acyltransf 92..710 CDD:459926 173/666 (26%)
CPT2NP_647756.1 Carn_acyltransf 48..650 CDD:459926 173/667 (26%)

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