DRSC/TRiP Functional Genomics Resources

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Protein Alignment ChAT and cha-1

DIOPT Version :9

Sequence 1:NP_477004.5 Gene:ChAT / 42249 FlyBaseID:FBgn0000303 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001023603.1 Gene:cha-1 / 24105307 WormBaseID:WBGene00000481 Length:627 Species:Caenorhabditis elegans


Alignment Length:702 Identity:231/702 - (32%)
Similarity:354/702 - (50%) Gaps:119/702 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 KDSILSIP--KKWLSTAESVDEFGFPDTLPKVPVPALDETMADYIR--ALEPITTPAQLERTKEL 122
            |:.:..:|  ..|..||           |||.|||:|:.|:..|:.  |:..:...|.|..|.:.
 Worm     3 KEKVDELPPNDNWYETA-----------LPKPPVPSLEATLDRYLEYAAVVAVGQKASLATTHDA 56

  Fly   123 IRQF---SAPQGIGARLHQYLLDKREAEDNWAYYYWLNEMYMDIRIPLPINSNPGMVFPPRRFKT 184
            ..:|   :.|      |.:.||:..|...|||..:||.||||.:|:|.|:|||||.:||..:|:|
 Worm    57 AHKFVRQATP------LQEQLLEIAEKSPNWATKFWLPEMYMRVRMPTPVNSNPGYIFPKVKFET 115

  Fly   185 VHDVAHFAARLLDGILSHREMLDSGELPLERAASREKNQPLCMAQYYRLLGSCRRPGVKQDSQFL 249
            ..|...:.|.|..|:|.::.::|:.::..|::...:|.| :||.||.|:|...|.|||.:|:|. 
 Worm   116 KEDHIKYTALLTRGLLEYKNLIDTKQVCREKSTGAQKLQ-MCMEQYDRVLSCYREPGVGEDTQI- 178

  Fly   250 PSRERLNDEDRHVVVICRNQMYCVVLQASDRGKL-SESEIASQILYVLSDAPCLPAKPVPVGLLT 313
             .:::.||.:.||:|:||||.:  :|.:...|.| |.:::..|:..:...:.........:|...
 Worm   179 -RKQKTNDGNEHVLVMCRNQTF--LLHSRINGALVSYADVEYQLAQIEEISKINQNNTANIGASG 240

  Fly   314 AEPRSTWARDREMLQEDERNQRNLELIETAQVVLCLD--EPL-------------AGNFNARGFT 363
            ..||...|...:.:...|:|.::.|.:::|..|:|||  :|:             ...|.|||::
 Worm   241 VGPRDNAALFWQDMLTVEQNSKSYEWVKSALFVVCLDMEDPIDYGKNDTMSISEKEKEFVARGYS 305

  Fly   364 GATPTVHRAGDRDETNMAHEMIHGGGSEYNSGNRWFDKTMQLIICTDGTWGLCYEHSCSEGIAVV 428
            ..|                    |.||.....|||:|.|:||::.:.|..|||.|||.:|||.::
 Worm   306 TLT--------------------GHGSSKFGLNRWYDATIQLVVSSSGVNGLCIEHSTAEGIVII 350

  Fly   429 QLLEKIYKKIEEHPDED---NGLPQHHLPPPERLEWHVGPQLQLRFAQASKSV--------DKCI 482
            .:.|...:..:::....   |.:...|   |:.|.||        |::.|:::        |:..
 Worm   351 NMAETAIRYAQKYFKSKMVWNDVRNVH---PKSLTWH--------FSENSRNILKKQAEVFDELA 404

  Fly   483 DDLDFYVYRYQSYGKTFIKSCQVSPDVYIQLALQLAHYKLYGRLVATYESASTRRFLHGRVDCIR 547
            ::|:..|..:..:||..||:.:||||.:|||.:||||||.:|.||:||||||.|||..||||.||
 Worm   405 NELELEVLIFNEFGKDSIKNWRVSPDGFIQLIMQLAHYKTHGHLVSTYESASVRRFGAGRVDNIR 469

  Fly   548 AASTEALEWAKAMCQGEGANVPLESDREDEEESRKVKFSIYSKDHLRELFRCAVARQTEVMVKNI 612
            |.:.|||||..||.          |.:|.:|  ||:           |||:.||.:|.:|.::||
 Worm   470 ANTQEALEWVTAMA----------SKKESKE--RKL-----------ELFKKAVLKQVKVTLENI 511

  Fly   613 LGNGIDIPLLGL----REASIEVTGE-MHELFKDESYIISQCFLLSTSQVACS---TDSFMGYGP 669
            .|.|:|..|..|    ||.. |.||| :..||.|..:.....|.||||||..|   .|.::.||.
 Worm   512 SGYGVDNHLCALFCLARERE-ETTGEDIPSLFLDPLWSEVMRFPLSTSQVTTSLDIPDCYLTYGA 575

  Fly   670 VTPRGYGCSYNPHPEQIVFCVSAFYSCEDTSASRYAKSLQDSLDIMRDLLQN 721
            |...||||.||..|::::|..:||.|...|....:.|||..::..:::||.|
 Worm   576 VVRDGYGCPYNIQPDRVIFAPTAFRSDPRTDLQHFKKSLAGAMRDVKELLSN 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChATNP_477004.5 Carn_acyltransf 88..716 CDD:279140 223/667 (33%)
cha-1NP_001023603.1 Carn_acyltransf 20..622 CDD:279140 223/667 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166546
Domainoid 1 1.000 319 1.000 Domainoid score I674
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 324 1.000 Inparanoid score I1468
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45782
OrthoDB 1 1.010 - - D167256at33208
OrthoFinder 1 1.000 - - FOG0001049
OrthoInspector 1 1.000 - - oto19054
orthoMCL 1 0.900 - - OOG6_107067
Panther 1 1.100 - - LDO PTHR22589
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2058
SonicParanoid 1 1.000 - - X630
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1312.940

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