DRSC/TRiP Functional Genomics Resources

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Protein Alignment ChAT and cpt-2

DIOPT Version :9

Sequence 1:NP_477004.5 Gene:ChAT / 42249 FlyBaseID:FBgn0000303 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001040977.2 Gene:cpt-2 / 178025 WormBaseID:WBGene00011122 Length:646 Species:Caenorhabditis elegans


Alignment Length:705 Identity:187/705 - (26%)
Similarity:318/705 - (45%) Gaps:106/705 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 RLSNITPSDTG--WKDSILSIPKKWLSTAESVDEFGFPDTLPKVPVPALDETMADYIRALEPITT 112
            |.||:..|.|.  .|.::.....::|..:| :..:.|..:|.::|:|.|.:|:..|:.:.:.:.:
 Worm     3 RSSNLCRSITASRGKHALTGDDYQYLEKSE-IPSYHFQKSLRRLPIPKLPDTVNRYLASSKAVLS 66

  Fly   113 PAQLERTKELIRQFSAPQGIGARLHQYLL--DKREAEDNWAYYYWLNEMYMDIRIPLPINSNPGM 175
            |....:|:..||.|.|.:  |.:|.:.||  ||...:.::....|. :||:..|:|:.:|.||.|
 Worm    67 PDVFAKTEATIRSFEANE--GPKLQEALLEYDKAHRDTSYISEPWF-DMYLRARVPVAVNYNPFM 128

  Fly   176 VFPPRRFKTVHDVAHFAARLLDGILSHREMLDSGELPLERAASREKNQ----------------- 223
            ::.|......:|....|..|.......:..||...|..|......|..                 
 Worm   129 MYAPDPNPKFNDQLTRATNLAISYARIKRSLDENLLGPEVFHMNPKKSDTKLFRTVCKTLPPSLS 193

  Fly   224 ----------PLCMAQYYRLLGSCRRPGVKQDSQFLPSRERLNDEDRHVVVICRNQMYCVVLQAS 278
                      ||.|:||..|....|.|..::|..:|.:.:      :|.|...:...|.|.: ..
 Worm   194 WFGAVAFKAFPLDMSQYKSLFCGSRIPKKEKDMLYLDASQ------KHFVAFYKGHPYAVRI-FD 251

  Fly   279 DRGKLSESE-IASQILYVLSDAPCLPAKP-VPVGLLTAEPRSTWARDREMLQEDERNQRNLELIE 341
            |.|||.::| :.:.:.::||:..  .|.| ..:|.||:..|.:||..|..| |:..|...|:.|:
 Worm   252 DDGKLLDAEDVHASLAWILSNGK--EAAPESSIGSLTSLDRDSWAEARVEL-ENAGNGEYLKKID 313

  Fly   342 TAQVVLCLDEPLAGNFNARGFTGATPTVHRAGDRDETNMAHEMIHGGGSEYNSGNRWFDKTMQLI 406
            .....:|||:                    ....:...:...::.|.    ::.||||||..|.|
 Worm   314 GGLFAICLDD--------------------LKTEEHKRLVQSLLIGD----DARNRWFDKCFQTI 354

  Fly   407 ICTDGTWGLCYEHSCSEGIAVVQLLEKIYKKIEEH----PDEDNGLPQHHLPP-PERLEWHVGPQ 466
            |..:|...:.:|||..:|:||::|:|:.:|...::    ||:   .|:.|.|. .:.||:.:...
 Worm   355 IDANGQATINFEHSWGDGVAVLRLMEESFKDTNKNHFVSPDD---TPKSHNPAHVQALEFKLTDS 416

  Fly   467 LQLRFAQASKSVDKCIDDLDFYVYRYQSYGKTFIKSCQVSPDVYIQLALQLAHYKLYGRLVATYE 531
            |:.:.:.|.|.......||||....::...:..||..::|||..:|||:|:|.|.||...|.|||
 Worm   417 LKSKISDAQKKHVSANSDLDFATMEFEGLNRDLIKKTKLSPDSVMQLAIQMAFYSLYKEFVPTYE 481

  Fly   532 SASTRRFLHGRVDCIRAASTEALEWAKAMCQGEGANVPLESDREDEEESRKVKFSIYSKDHLREL 596
            |.||..||.||.:|:|:|::.......|:         ||.:|:|                :|:|
 Worm   482 SCSTAAFLKGRTECMRSATSATRAATLAI---------LEENRKD----------------VRQL 521

  Fly   597 FRCAVARQTEVMVKNILGNGIDIPLLGLREASIEVTGEMHELFKDESYIISQCFLLSTSQVACST 661
            ......:..:::.:..:|.|.|..||||:..:..::....:.|:|..|.....|:||||.::..|
 Worm   522 LTDCSTQHFQLVKEASMGQGYDRHLLGLKITAQRLSQPTPDFFQDPGYTRMGHFVLSTSTLSTDT 586

  Fly   662 DSFMGYGPVTPRGYGCSYNPHPEQIVFCVSAFYSCEDTSASRYAKSLQDSLDIMR 716
            ..|.|:|||...|:|..||..|.::...:|:..|..|.:|  ::.:|..||||:|
 Worm   587 IVFGGFGPVVQDGFGIGYNVVPNKLGAVISSNKSKRDAAA--FSNALYKSLDILR 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChATNP_477004.5 Carn_acyltransf 88..716 CDD:279140 177/663 (27%)
cpt-2NP_001040977.2 Carn_acyltransf 42..639 CDD:376382 177/663 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D167256at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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