DRSC/TRiP Functional Genomics Resources

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Protein Alignment ChAT and CPT1A

DIOPT Version :9

Sequence 1:NP_477004.5 Gene:ChAT / 42249 FlyBaseID:FBgn0000303 Length:721 Species:Drosophila melanogaster
Sequence 2:XP_005273819.1 Gene:CPT1A / 1374 HGNCID:2328 Length:805 Species:Homo sapiens


Alignment Length:667 Identity:190/667 - (28%)
Similarity:313/667 - (46%) Gaps:102/667 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 FGFPDTLPKVPVPALDETMADYIRALEPITTPAQLERTKELIRQFSAPQGIGARLHQYLLDKREA 146
            :.|..:||::||||:.:|:..|::::.|:......:|...|.:.|:.  |:|.||..||..|...
Human   197 YSFQTSLPRLPVPAVKDTVNRYLQSVRPLMKEEDFKRMTALAQDFAV--GLGPRLQWYLKLKSWW 259

  Fly   147 EDNWAYYYWLNEMYMDIRIPLPINSNPG-----MVFPPRRFKTVHDVAHFAARLLDGILSHREML 206
            ..|:...:|...:|:..|.||.:|||..     .:.|      .|..|..|...:..||.:|..|
Human   260 ATNYVSDWWEEYIYLRGRGPLMVNSNYYAMDLLYILP------THIQAARAGNAIHAILLYRRKL 318

  Fly   207 DSGEL-PLERAASREKNQPLCMAQYYRLLGSCRRPGVKQDSQFLPSRERLNDEDRHVVVICRNQM 270
            |..|: |:....|   ..|||.||:.|:..:.|.||.:.|     :.:.:.| .:|:||..|.:.
Human   319 DREEIKPIRLLGS---TIPLCSAQWERMFNTSRIPGEETD-----TIQHMRD-SKHIVVYHRGRY 374

  Fly   271 YCVVLQASDRGKLSESEIASQILYVLSDAPCLPAKPVP----VGLLTAEPRSTWARDREMLQEDE 331
            :.|.|....| .|...|:..|:..:|.:.    ::|.|    :..|||..|..|||.|:......
Human   375 FKVWLYHDGR-LLKPREMEQQMQRILDNT----SEPQPGEARLAALTAGDRVPWARCRQAYFGRG 434

  Fly   332 RNQRNLELIETAQVVLCLDEPLAGNFNARGFTGATPTVHRAGDRDETNM---AHEMIHGGGSEYN 393
            :|:::|:.:|.|...:.|||...|              :|:.|.| |:|   |..::||     .
Human   435 KNKQSLDAVEKAAFFVTLDETEEG--------------YRSEDPD-TSMDSYAKSLLHG-----R 479

  Fly   394 SGNRWFDKTMQLIICTDGTWGLCYEHSCSEGIAVVQLLEKIYK--KIEEHPDED---NGLPQHHL 453
            ..:|||||:...::..:|..||..|||.::...|..|.|.:..  .::....||   .|....::
Human   480 CYDRWFDKSFTFVVFKNGKMGLNAEHSWADAPIVAHLWEYVMSIDSLQLGYAEDGHCKGDINPNI 544

  Fly   454 PPPERLEWHVGPQLQLRFAQASKSVDKCIDDLDFYVYRYQSYGKTFIKSCQVSPDVYIQLALQLA 518
            |.|.||:|.:..:.|.....:..:.:...:|:||:.:.:.::||..||.|:.|||.::|||||||
Human   545 PYPTRLQWDIPGECQEVIETSLNTANLLANDVDFHSFPFVAFGKGIIKKCRTSPDAFVQLALQLA 609

  Fly   519 HYKLYGRLVATYESASTRRFLHGRVDCIRAASTEALEWAKAMCQGEGANVPLESDREDEEESRKV 583
            |||..|:...|||::.||.|..||.:.:|:.:||:.::.:||.           |.....|.|..
Human   610 HYKDMGKFCLTYEASMTRLFREGRTETVRSCTTESCDFVRAMV-----------DPAQTVEQRLK 663

  Fly   584 KFSIYSKDHLRELFRCAVARQTEVMVKNILGNGIDIPLLGLREASIEVTGEMHELFKDESYIISQ 648
            .|.:.|:.| :.::|.|:.           |:|||..|..|...|..:..|...|    ..::|:
Human   664 LFKLASEKH-QHMYRLAMT-----------GSGIDRHLFCLYVVSKYLAVESPFL----KEVLSE 712

  Fly   649 CFLLSTSQVACS-------------TDSFMGYGPVTPRGYGCSYNPHPEQIV-FCVSAFYSCEDT 699
            .:.|||||....             ..|..|:|||...|||.||....|.:: |.:|:.:||.:|
Human   713 PWRLSTSQTPQQQVELFDLENNPEYVSSGGGFGPVADDGYGVSYILVGENLINFHISSKFSCPET 777

  Fly   700 SASRYAKSLQDSL-DIM 715
            .:.|:.:.|:::: ||:
Human   778 DSHRFGRHLKEAMTDII 794

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChATNP_477004.5 Carn_acyltransf 88..716 CDD:279140 189/661 (29%)
CPT1AXP_005273819.1 CPT_N 33..78 CDD:293093
Carn_acyltransf 203..793 CDD:279140 187/658 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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