DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ChAT and CPT1A

DIOPT Version :10

Sequence 1:NP_477004.5 Gene:ChAT / 42249 FlyBaseID:FBgn0000303 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001867.2 Gene:CPT1A / 1374 HGNCID:2328 Length:773 Species:Homo sapiens


Alignment Length:667 Identity:190/667 - (28%)
Similarity:313/667 - (46%) Gaps:102/667 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 FGFPDTLPKVPVPALDETMADYIRALEPITTPAQLERTKELIRQFSAPQGIGARLHQYLLDKREA 146
            :.|..:||::||||:.:|:..|::::.|:......:|...|.:.|:.  |:|.||..||..|...
Human   165 YSFQTSLPRLPVPAVKDTVNRYLQSVRPLMKEEDFKRMTALAQDFAV--GLGPRLQWYLKLKSWW 227

  Fly   147 EDNWAYYYWLNEMYMDIRIPLPINSNPG-----MVFPPRRFKTVHDVAHFAARLLDGILSHREML 206
            ..|:...:|...:|:..|.||.:|||..     .:.|      .|..|..|...:..||.:|..|
Human   228 ATNYVSDWWEEYIYLRGRGPLMVNSNYYAMDLLYILP------THIQAARAGNAIHAILLYRRKL 286

  Fly   207 DSGEL-PLERAASREKNQPLCMAQYYRLLGSCRRPGVKQDSQFLPSRERLNDEDRHVVVICRNQM 270
            |..|: |:....|   ..|||.||:.|:..:.|.||.:.|     :.:.:.| .:|:||..|.:.
Human   287 DREEIKPIRLLGS---TIPLCSAQWERMFNTSRIPGEETD-----TIQHMRD-SKHIVVYHRGRY 342

  Fly   271 YCVVLQASDRGKLSESEIASQILYVLSDAPCLPAKPVP----VGLLTAEPRSTWARDREMLQEDE 331
            :.|.|....| .|...|:..|:..:|.:.    ::|.|    :..|||..|..|||.|:......
Human   343 FKVWLYHDGR-LLKPREMEQQMQRILDNT----SEPQPGEARLAALTAGDRVPWARCRQAYFGRG 402

  Fly   332 RNQRNLELIETAQVVLCLDEPLAGNFNARGFTGATPTVHRAGDRDETNM---AHEMIHGGGSEYN 393
            :|:::|:.:|.|...:.|||...|              :|:.|.| |:|   |..::||     .
Human   403 KNKQSLDAVEKAAFFVTLDETEEG--------------YRSEDPD-TSMDSYAKSLLHG-----R 447

  Fly   394 SGNRWFDKTMQLIICTDGTWGLCYEHSCSEGIAVVQLLEKIYK--KIEEHPDED---NGLPQHHL 453
            ..:|||||:...::..:|..||..|||.::...|..|.|.:..  .::....||   .|....::
Human   448 CYDRWFDKSFTFVVFKNGKMGLNAEHSWADAPIVAHLWEYVMSIDSLQLGYAEDGHCKGDINPNI 512

  Fly   454 PPPERLEWHVGPQLQLRFAQASKSVDKCIDDLDFYVYRYQSYGKTFIKSCQVSPDVYIQLALQLA 518
            |.|.||:|.:..:.|.....:..:.:...:|:||:.:.:.::||..||.|:.|||.::|||||||
Human   513 PYPTRLQWDIPGECQEVIETSLNTANLLANDVDFHSFPFVAFGKGIIKKCRTSPDAFVQLALQLA 577

  Fly   519 HYKLYGRLVATYESASTRRFLHGRVDCIRAASTEALEWAKAMCQGEGANVPLESDREDEEESRKV 583
            |||..|:...|||::.||.|..||.:.:|:.:||:.::.:||.           |.....|.|..
Human   578 HYKDMGKFCLTYEASMTRLFREGRTETVRSCTTESCDFVRAMV-----------DPAQTVEQRLK 631

  Fly   584 KFSIYSKDHLRELFRCAVARQTEVMVKNILGNGIDIPLLGLREASIEVTGEMHELFKDESYIISQ 648
            .|.:.|:.| :.::|.|:.           |:|||..|..|...|..:..|...|    ..::|:
Human   632 LFKLASEKH-QHMYRLAMT-----------GSGIDRHLFCLYVVSKYLAVESPFL----KEVLSE 680

  Fly   649 CFLLSTSQVACS-------------TDSFMGYGPVTPRGYGCSYNPHPEQIV-FCVSAFYSCEDT 699
            .:.|||||....             ..|..|:|||...|||.||....|.:: |.:|:.:||.:|
Human   681 PWRLSTSQTPQQQVELFDLENNPEYVSSGGGFGPVADDGYGVSYILVGENLINFHISSKFSCPET 745

  Fly   700 SASRYAKSLQDSL-DIM 715
            .:.|:.:.|:::: ||:
Human   746 DSHRFGRHLKEAMTDII 762

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChATNP_477004.5 Carn_acyltransf 92..710 CDD:459926 185/649 (29%)
CPT1ANP_001867.2 CPT_N 1..47 CDD:465132
Carn_acyltransf 174..756 CDD:459926 185/650 (28%)
Blue background indicates that the domain is not in the aligned region.

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