DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ChAT and Cpt2

DIOPT Version :10

Sequence 1:NP_477004.5 Gene:ChAT / 42249 FlyBaseID:FBgn0000303 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_034079.2 Gene:Cpt2 / 12896 MGIID:109176 Length:658 Species:Mus musculus


Alignment Length:704 Identity:190/704 - (26%)
Similarity:311/704 - (44%) Gaps:116/704 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 ILSIPKKWLSTAESVDEF---------GFPDTLPKVPVPALDETMADYIRALEPITTPAQLERTK 120
            :|..|.:.||......|:         .:.|:||::|:|.|::||..|:.|.:|:...:|..:|:
Mouse    17 VLGAPSRPLSAVSGPAEYLQHSIVPTMHYQDSLPRLPIPKLEDTMKRYLSAQKPLLNDSQFRKTE 81

  Fly   121 ELIRQFSAPQGIGARLHQYLL--DKREAEDNWAYYYWLNEMYMDIRIPLPINSNPGMVFPPRRFK 183
            .|.:.|.  .|||..||.:||  ||:....::....|. :||:..|..:.:|.||.|.|.|....
Mouse    82 VLCKDFE--NGIGKELHAHLLAQDKQNKHTSYISGPWF-DMYLTARDSVVLNFNPFMAFNPDPKS 143

  Fly   184 TVHDVAHFAARLLDGILSHREMLDSGELPLE---------------------------RAASREK 221
            ..:|....|..|....:...:.|.:|.|..|                           ..|....
Mouse   144 EYNDQLTRATNLTVSAVRFLKTLRAGLLEPEVFHLNPARSDTDAFKRLIRFVPSSLSWYGAYLVN 208

  Fly   222 NQPLCMAQYYRLLGSCRRPGVKQDSQFLPSRERL--NDEDRHVVVICRNQMYCVVLQASDRGKLS 284
            ..||.|:||:||..|.|.|        .|||:.|  :.:.||::|:.:...|...:...|...::
Mouse   209 AYPLDMSQYFRLFNSTRIP--------KPSRDELFTDTKARHLLVLRKGHFYVFDVLDQDGNIVN 265

  Fly   285 ESEIASQILYVLSDAPCLPAKPVPVGLLTAEPRSTWARDREMLQEDERNQRNLELIETAQVVLCL 349
            .|||.:.:.|:|||:.  |....|:..||:|.|..||..|:.|... .|:..|..:::|...|||
Mouse   266 PSEIQAHLKYILSDSS--PVPEFPLAYLTSENRDVWAELRQKLIHG-GNEETLRKVDSAVFCLCL 327

  Fly   350 DE-PLAGNFNARGFTGATPTVHRAGDRDETNMAHEMIHGGGSEYNSGNRWFDKTMQLIICTDGTW 413
            |: |:                     :|..:::|.|:||.|:     ||||||:..||:..|||.
Mouse   328 DDFPM---------------------KDLVHLSHTMLHGDGT-----NRWFDKSFNLIVAKDGTA 366

  Fly   414 GLCYEHSCSEGIAVVQLLEKIYKKIEEHPDEDNGLPQHHLPPP-------ERLEWHVGPQLQLRF 471
            .:.:||:..:|:||::...::::...:.|    .:.....|..       ::|.:.:...|:...
Mouse   367 AVHFEHAWGDGVAVLRFFNEVFRDSTQTP----AIAPQSQPAATDSSVSVQKLSFKLSSALKAGV 427

  Fly   472 AQASKSVDKCIDDLDFYVYRYQSYGKTFIKSCQVSPDVYIQLALQLAHYKLYGRLVATYESASTR 536
            ..|.:..|..:..|.....::|..||.|:|..::|||...|||.|:|..:.||:.||||||.||.
Mouse   428 TAAKEKFDATMKTLTIDAIQFQRGGKEFLKKKKLSPDAVAQLAFQMAFLRQYGQTVATYESCSTA 492

  Fly   537 RFLHGRVDCIRAASTEALEWAKAMCQGEGANVPLESDREDEEESRKVKFSIYSKDHLRELFRCAV 601
            .|.|||.:.||.||......::|..:               |.|   |.|:....|:  :..|: 
Mouse   493 AFKHGRTETIRPASIFTKRCSEAFVR---------------EPS---KHSVGELQHM--MAECS- 536

  Fly   602 ARQTEVMVKNILGNGIDIPLLGLREASIEVTGEMHELFKDESYIISQCFLLSTSQVACSTDSFMG 666
            ....::..:..:|.|.|..|..||..:......:.||::|.:|......:||||.::....|..|
Mouse   537 KYHGQLTKEAAMGQGFDRHLFALRYLAAARGVTLPELYQDPAYQRINHNILSTSTLSSPAVSLGG 601

  Fly   667 YGPVTPRGYGCSYNPHPEQIVFCVSAFYSCEDTSASRYAKSLQDSLDIMRDLLQ 720
            :.||.|.|:|.:|..|.:.|...||::   ...:|..:...:|..|:.|.|.|:
Mouse   602 FAPVVPDGFGIAYAVHDDWIGCNVSSY---SGRNAREFLHCVQKCLEDMFDALE 652

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChATNP_477004.5 Carn_acyltransf 92..710 CDD:459926 177/656 (27%)
Cpt2NP_034079.2 Carn_acyltransf 52..642 CDD:459926 177/657 (27%)

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