DRSC/TRiP Functional Genomics Resources

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Protein Alignment ChAT and chatb

DIOPT Version :9

Sequence 1:NP_477004.5 Gene:ChAT / 42249 FlyBaseID:FBgn0000303 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001278811.1 Gene:chatb / 103171573 ZFINID:ZDB-GENE-140429-2 Length:635 Species:Danio rerio


Alignment Length:660 Identity:249/660 - (37%)
Similarity:359/660 - (54%) Gaps:80/660 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 PKVPVPALDETMADYIRALEPITTPAQLERTKELIRQFSAPQGIGARLHQYLLDKREAEDNWAYY 153
            |.:|||.|.:|:..|:||::.:.:.||..||...:.:|....|.|..|.:.||::|....||.|.
Zfish    19 PPLPVPELQQTLVWYLRAVQHLVSEAQFRRTSAAVEEFRRAGGAGETLQRRLLERRAHTHNWVYQ 83

  Fly   154 YWLNEMYMDIRIPLPINSNPGMVFPPRRFKTVHDVAHFAARLLDGILSHREMLDSGELPLERAAS 218
            .||.:||:...:|||::|:|.:|.|.:.|:...|...|||||:.|:...:..:|...|||:.|.|
Zfish    84 LWLEDMYLKNTLPLPVHSSPALVLPIQAFREPGDRLEFAARLILGVCELKTAVDRDSLPLDSAGS 148

  Fly   219 REKNQPLCMAQYYRLLGSCRRPGVKQDSQFLPSRERLNDEDRHVVVICRNQMYCVVLQASDRGKL 283
               ..||||.||.||....||.|::||:  |.|.|  ..::.|.:|.||||.:.:.|....| .|
Zfish   149 ---GVPLCMDQYKRLFSCYRRAGLQQDT--LISTE--PSQNTHAIVACRNQFFVLNLSVGCR-TL 205

  Fly   284 SESEIASQILYVL----------SDAPCLPAKPVPVGLLTAEPRSTWARDREMLQEDERNQRNLE 338
            |:||:..|:|::.          :.....|.:|..:|||||..|..||..|:.|..||.|:|:||
Zfish   206 SQSELQHQLLWITEHTHTHTHTHTHTHTTPEQPPALGLLTAACRRDWATARQQLLTDEENRRSLE 270

  Fly   339 LIETAQVVLCLDEPLAGNFNARGFTGATPTVHRAGDRDETNMAHEMIHGGGSEYNSGNRWFDKTM 403
            |:|....|:|||||          .|..|.   |.||     |..::||||.:.|.||||:||.:
Zfish   271 LMERCVCVVCLDEP----------AGLEPC---AADR-----AALILHGGGPDRNGGNRWYDKPL 317

  Fly   404 QLIICTDGTWGLCYEHSCSEGIAVVQLLEKIYKKIE----EHPDEDNGLPQHH------------ 452
            |.::..||..|:..|||.:|||.:||.:|.:.|:..    ||....|   .||            
Zfish   318 QFVVGADGVCGVVCEHSAAEGIVLVQCVEHVLKRTSVSELEHTHLSN---THHSDTHCSDTHVSG 379

  Fly   453 ----LPPPERLEWHVGPQLQLRFAQASKSVDKCIDDLDFYVYRYQSYGKTFIKSCQVSPDVYIQL 513
                ||.|.||.|...|:::...|.|:..:...:.||...|:.:.::|||. |..::|||.:|||
Zfish   380 WTTGLPQPRRLLWKCSPRVEEMLAAAANQLQGLVWDLHMRVFVFSAFGKTLXKQQRISPDGFIQL 444

  Fly   514 ALQLAHYKLYGRLVATYESASTRRFLHGRVDCIRAASTEALEWAKAMCQGEGANVPLESDREDEE 578
            |:|||:|:.:.|.|:||||||.|||..|||:.||:|:.|||.:..|| .|.||:|      :|.|
Zfish   445 AIQLAYYRTHSRAVSTYESASLRRFHLGRVEIIRSATAEALRFCTAM-SGGGASV------QDSE 502

  Fly   579 ESRKVKFSIYSKDHLRELFRCAVARQTEVMVKNILGNGIDIPLLGLREASIEVTGEMHELFKDES 643
            :..|:              |.|...|.::.::.:.|||:|..||||||.:.::..:..::|.||:
Zfish   503 KMEKL--------------RAAADAQAQLTLRAVTGNGMDNHLLGLREMARQMEMQTPDIFSDET 553

  Fly   644 YIISQCFLLSTSQVACSTDSFMGYGPVTPRGYGCSYNPHPEQIVFCVSAFYSCEDTSASRYAKSL 708
            |.||..|:||||||....:.|..||||.|.|||..|||..:.|||.||:|...::|.:.|.|:.|
Zfish   554 YKISNHFILSTSQVPTEMEMFCCYGPVVPDGYGVCYNPQSDHIVFSVSSFRENKETCSDRLAEEL 618

  Fly   709 QDSLDIMRDL 718
            |.:|..|:||
Zfish   619 QVALLDMKDL 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChATNP_477004.5 Carn_acyltransf 88..716 CDD:279140 246/656 (38%)
chatbNP_001278811.1 Carn_acyltransf 27..626 CDD:279140 241/648 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D167256at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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