DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ChAT and chata

DIOPT Version :10

Sequence 1:NP_477004.5 Gene:ChAT / 42249 FlyBaseID:FBgn0000303 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001124191.1 Gene:chata / 100170938 ZFINID:ZDB-GENE-080102-2 Length:637 Species:Danio rerio


Alignment Length:647 Identity:243/647 - (37%)
Similarity:359/647 - (55%) Gaps:43/647 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 LSTAESVDEFGFPDTLPKVPVPALDETMADYIRALEPITTPAQLERTKELIRQFSAPQGIGARLH 137
            :|..|...:.|.|..|||:|:|.|.:|:..|:..:..:....|..:||.::.:|.||.|:|..|.
Zfish     3 VSKREQSKDTGDPCALPKLPIPPLKQTLDMYLTCMGHLVPEDQFRKTKAVVEKFGAPGGVGETLQ 67

  Fly   138 QYLLDKREAEDNWAYYYWLNEMYMDIRIPLPINSNPGMVFPPRRFKTVHDVAHFAARLLDGILSH 202
            :.||::.|.:.||.|.|||.:||::.|:.||:||:|.|||..:.||...||..|||.|:.|:|.:
Zfish    68 KKLLERSEQKANWVYDYWLEDMYLNNRLALPVNSSPVMVFHKQNFKGQSDVLRFAANLISGVLEY 132

  Fly   203 REMLDSGELPLERAASREKNQPLCMAQYYRLLGSCRRPGVKQDSQFLPSRERLNDEDRHVVVICR 267
            :.::|...||:|.|..:....||||.||.::..|.|.||.|.|: .:..:..:..|..|::|.|:
Zfish   133 KALIDGRALPVEHARGQLAGTPLCMDQYNKVFTSYRLPGTKTDT-LVAQKSTVMPEPEHIIVACK 196

  Fly   268 NQMYCVVLQASDRGKLSESEIASQILYVLSDAPCLPAKPVPVGLLTAEPRSTWARDREMLQEDER 332
            ||.:.:.:..:.| :|:|.::.:|:..:...|.....:..|:||||::.|:.||..|.:|.:|..
Zfish   197 NQFFVLDVMVNFR-RLNEKDLYTQLERIRKMADIEEERQPPIGLLTSDGRTQWAEARNILIKDST 260

  Fly   333 NQRNLELIETAQVVLCLDEPLAGNFNARGFTGATPTVHRAGDRDETNMAHEMIHGGGSEYNSGNR 397
            |:.:|::||....::||||..|...|                  ::|.|..|:||||::.|.|||
Zfish   261 NRDSLDMIERCLCLVCLDEETATELN------------------DSNRALLMLHGGGTDKNGGNR 307

  Fly   398 WFDKTMQLIICTDGTWGLCYEHSCSEGIAVVQLLEKIYKKIEEHPDE-DNGLPQHHLPPPERLEW 461
            |:||.||.:|..||..|:..|||..|||.:||..|.:.:.:...|.: ........||.|.||.|
Zfish   308 WYDKPMQFVIGADGCCGVVCEHSPFEGIVLVQCSEYLLRYMRGSPSKLVRAASMSELPAPRRLRW 372

  Fly   462 HVGPQLQLRFAQASKSVDKCIDDLDFYVYRYQSYGKTFIKSCQVSPDVYIQLALQLAHYKLYGRL 526
            ...|.:|...:.::..:.|.:.:||..|:::..|||.|||..::|||.|:|:|||...|:.:|||
Zfish   373 KCSPDIQTFLSASADRLQKLVKNLDMNVHKFTGYGKEFIKRQKMSPDAYVQVALQFTFYRCHGRL 437

  Fly   527 VATYESASTRRFLHGRVDCIRAASTEALEWAKAMCQGEGANVPLESDREDEEESRKVKFSIYSKD 591
            |.||||||.|||..||||.||:::.|||.:.|||..|        |...|.|:            
Zfish   438 VPTYESASIRRFQEGRVDNIRSSTPEALAFVKAMASG--------SKITDAEK------------ 482

  Fly   592 HLRELFRCAVARQTEVMVKNILGNGIDIPLLGLREASIEVTGEMHELFKDESYIISQCFLLSTSQ 656
              .||...|:..||...:..|.|..||..||||||.:.|:..|..|||.|.:|..|..|.|||||
Zfish   483 --MELLWTAIKAQTNYTILAITGMAIDNHLLGLREIAKELKLEKPELFSDTTYATSIHFTLSTSQ 545

  Fly   657 VACSTDSFMGYGPVTPRGYGCSYNPHPEQIVFCVSAFYSCEDTSASRYAKSLQDSLDIMRDL 718
            |..:.:.|..||||.|.|||..|||..:.|:||||:|..|.:||:..:.|:|:..|..|:||
Zfish   546 VPTTEEMFCCYGPVVPNGYGACYNPQTDHILFCVSSFRECAETSSDLFVKTLEGCLKEMQDL 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChATNP_477004.5 Carn_acyltransf 92..710 CDD:459926 232/618 (38%)
chataNP_001124191.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20 5/16 (31%)
Carn_acyltransf 21..598 CDD:459926 231/618 (37%)

Return to query results.
Submit another query.