DRSC/TRiP Functional Genomics Resources

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Protein Alignment ChAT and chata

DIOPT Version :9

Sequence 1:NP_477004.5 Gene:ChAT / 42249 FlyBaseID:FBgn0000303 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001124191.1 Gene:chata / 100170938 ZFINID:ZDB-GENE-080102-2 Length:637 Species:Danio rerio


Alignment Length:647 Identity:243/647 - (37%)
Similarity:359/647 - (55%) Gaps:43/647 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 LSTAESVDEFGFPDTLPKVPVPALDETMADYIRALEPITTPAQLERTKELIRQFSAPQGIGARLH 137
            :|..|...:.|.|..|||:|:|.|.:|:..|:..:..:....|..:||.::.:|.||.|:|..|.
Zfish     3 VSKREQSKDTGDPCALPKLPIPPLKQTLDMYLTCMGHLVPEDQFRKTKAVVEKFGAPGGVGETLQ 67

  Fly   138 QYLLDKREAEDNWAYYYWLNEMYMDIRIPLPINSNPGMVFPPRRFKTVHDVAHFAARLLDGILSH 202
            :.||::.|.:.||.|.|||.:||::.|:.||:||:|.|||..:.||...||..|||.|:.|:|.:
Zfish    68 KKLLERSEQKANWVYDYWLEDMYLNNRLALPVNSSPVMVFHKQNFKGQSDVLRFAANLISGVLEY 132

  Fly   203 REMLDSGELPLERAASREKNQPLCMAQYYRLLGSCRRPGVKQDSQFLPSRERLNDEDRHVVVICR 267
            :.::|...||:|.|..:....||||.||.::..|.|.||.|.|: .:..:..:..|..|::|.|:
Zfish   133 KALIDGRALPVEHARGQLAGTPLCMDQYNKVFTSYRLPGTKTDT-LVAQKSTVMPEPEHIIVACK 196

  Fly   268 NQMYCVVLQASDRGKLSESEIASQILYVLSDAPCLPAKPVPVGLLTAEPRSTWARDREMLQEDER 332
            ||.:.:.:..:.| :|:|.::.:|:..:...|.....:..|:||||::.|:.||..|.:|.:|..
Zfish   197 NQFFVLDVMVNFR-RLNEKDLYTQLERIRKMADIEEERQPPIGLLTSDGRTQWAEARNILIKDST 260

  Fly   333 NQRNLELIETAQVVLCLDEPLAGNFNARGFTGATPTVHRAGDRDETNMAHEMIHGGGSEYNSGNR 397
            |:.:|::||....::||||..|...|                  ::|.|..|:||||::.|.|||
Zfish   261 NRDSLDMIERCLCLVCLDEETATELN------------------DSNRALLMLHGGGTDKNGGNR 307

  Fly   398 WFDKTMQLIICTDGTWGLCYEHSCSEGIAVVQLLEKIYKKIEEHPDE-DNGLPQHHLPPPERLEW 461
            |:||.||.:|..||..|:..|||..|||.:||..|.:.:.:...|.: ........||.|.||.|
Zfish   308 WYDKPMQFVIGADGCCGVVCEHSPFEGIVLVQCSEYLLRYMRGSPSKLVRAASMSELPAPRRLRW 372

  Fly   462 HVGPQLQLRFAQASKSVDKCIDDLDFYVYRYQSYGKTFIKSCQVSPDVYIQLALQLAHYKLYGRL 526
            ...|.:|...:.::..:.|.:.:||..|:::..|||.|||..::|||.|:|:|||...|:.:|||
Zfish   373 KCSPDIQTFLSASADRLQKLVKNLDMNVHKFTGYGKEFIKRQKMSPDAYVQVALQFTFYRCHGRL 437

  Fly   527 VATYESASTRRFLHGRVDCIRAASTEALEWAKAMCQGEGANVPLESDREDEEESRKVKFSIYSKD 591
            |.||||||.|||..||||.||:::.|||.:.|||..|        |...|.|:            
Zfish   438 VPTYESASIRRFQEGRVDNIRSSTPEALAFVKAMASG--------SKITDAEK------------ 482

  Fly   592 HLRELFRCAVARQTEVMVKNILGNGIDIPLLGLREASIEVTGEMHELFKDESYIISQCFLLSTSQ 656
              .||...|:..||...:..|.|..||..||||||.:.|:..|..|||.|.:|..|..|.|||||
Zfish   483 --MELLWTAIKAQTNYTILAITGMAIDNHLLGLREIAKELKLEKPELFSDTTYATSIHFTLSTSQ 545

  Fly   657 VACSTDSFMGYGPVTPRGYGCSYNPHPEQIVFCVSAFYSCEDTSASRYAKSLQDSLDIMRDL 718
            |..:.:.|..||||.|.|||..|||..:.|:||||:|..|.:||:..:.|:|:..|..|:||
Zfish   546 VPTTEEMFCCYGPVVPNGYGACYNPQTDHILFCVSSFRECAETSSDLFVKTLEGCLKEMQDL 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChATNP_477004.5 Carn_acyltransf 88..716 CDD:279140 236/628 (38%)
chataNP_001124191.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20 5/16 (31%)
Carn_acyltransf 18..601 CDD:307070 235/624 (38%)
Coenzyme A binding. /evidence=ECO:0000250 407..419 6/11 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594980
Domainoid 1 1.000 430 1.000 Domainoid score I574
eggNOG 1 0.900 - - E1_KOG3717
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H40693
Inparanoid 1 1.050 438 1.000 Inparanoid score I1648
OMA 1 1.010 - - QHG45782
OrthoDB 1 1.010 - - D167256at33208
OrthoFinder 1 1.000 - - FOG0001049
OrthoInspector 1 1.000 - - otm24513
orthoMCL 1 0.900 - - OOG6_107067
Panther 1 1.100 - - LDO PTHR22589
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2058
SonicParanoid 1 1.000 - - X630
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1716.800

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