DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ChT and DUR3

DIOPT Version :9

Sequence 1:NP_650743.1 Gene:ChT / 42245 FlyBaseID:FBgn0038641 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_011847.1 Gene:DUR3 / 856370 SGDID:S000001008 Length:735 Species:Saccharomyces cerevisiae


Alignment Length:655 Identity:145/655 - (22%)
Similarity:261/655 - (39%) Gaps:131/655 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 YLLILVVG-IWAG---------RKKQSGNDSEEEVMLAGRSI--GLFVGIFTMTATWVGGGYING 66
            |.::|.:| ::||         ::.|....:.||...||||:  ||.......:..|......:.
Yeast    14 YAIVLGLGAVFAGMMVLTTYLLKRYQKEIITAEEFTTAGRSVKTGLVAAAVVSSWIWCSTLLTSS 78

  Fly    67 TAEAIYTSGLVWCQAPFGYALSLVFGGIFFA------NPMRKQGYITMLDPLQDSFGERMGGLLF 125
            |.|  |..|:.   ..:.||....|..|.||      ..|....: |.|:.::..:|:...|...
Yeast    79 TKE--YADGIF---GGYAYAAGACFQIIAFAILAIKTKQMAPNAH-TYLELVRTRYGKIGHGCYL 137

  Fly   126 LPALCGEVFWAAGILAALGATLSVIIDMDHRTSVILSSCIAIFYTLFGGLYSVAYTDVIQLFCIF 190
            ..|:...:...:.:|.:..|..|.:..|:...|..|.....:.||||||:.:...||.:.. |:.
Yeast   138 FYAIATNILVTSMLLTSGSAVFSDLTGMNTIASCFLLPVGVVVYTLFGGIKATFLTDYMHT-CVI 201

  Fly   191 IGLWMCIPF-AWSNEHV----GSLSDLEVDWIGHVEPKKHWLYIDY------------GLLLV-- 236
            |.:.:...| .::...|    |.:.||..:     ..|:|.:..:|            |:||:  
Yeast   202 IIIVLVFAFKVYATSDVLGSPGKVYDLVRE-----AAKRHPVDGNYQGEYMTMTSKSAGILLIIN 261

  Fly   237 ----FGGIPW-QVYFQRVLSSKTAGRAQLLSYVAAAGCILMAIPPVL-----IGAIAKATPWNET 291
                ||.:.. ..|:.:.:|:..|  |.|.:| |..|....|:|.::     :..:|..|..|..
Yeast   262 LIGNFGTVFLDNGYWNKAISASPA--ASLKAY-AIGGLAWFAVPSLISLTMGLACLAVETSPNFP 323

  Fly   292 DYKGPYPLTVDE--TSMILPMVLQYLTPDFVSFFGLGAVSA-------AVMSSADSSVLSAASMF 347
            .|  |.|||..:  :.::||...       ::..|.|...|       ||.|:..:.:::.:|:|
Yeast   324 TY--PDPLTSFQANSGLVLPAAA-------IAIMGKGGAVASLLMIFMAVTSAMSAELIAVSSVF 379

  Fly   348 ARNVYKLIFRQKASEMEIIWVMRVAIIVVGILATIMALTIPSIYG------LWSMCSDLVYVILF 406
            ..::|:.....:||..::|:...||.|..|:  .:...::...||      ::.|...::...:.
Yeast   380 TYDIYREYIDPRASGKKLIYTSHVACIFFGL--AMSGFSVGLYYGGISMGYIYEMMGIIISSAVL 442

  Fly   407 PQLLMVVHFKKHCNTYGSLSAYIVALAIRLSGGEAILGLAPLIK--YPGYDEETKEQMFPFRTMA 469
            |.:|.:      |:...:|.|.:|:..  |..|.||:......|  |.....:|....:|..|. 
Yeast   443 PVVLTL------CSKDMNLVAAVVSPI--LGTGLAIMSWLVCTKSLYKELTVDTTFMDYPMLTG- 498

  Fly   470 MLLSLVTLISVSWWTKMMFESGKLPPSYDYFRCVVNIPEDVQRVGDPSESGEQLSVMAGPLARSY 534
               :||.|:|.:.:..::....| |.::|:.:.     :|:.||.:.:|     .|.|.|..:.|
Yeast   499 ---NLVALLSPAIFIPILTYVFK-PQNFDWEKM-----KDITRVDETAE-----LVQADPDIQLY 549

  Fly   535 GAA-----------TMAGKDERNG-RINPALESDDDLPVAEARRINQETAQAQVKKMLDN----- 582
            .|.           ::....|:|. |:|.....:.:|.|..:..|.||. ..|::..||.     
Yeast   550 DAEANDKEQEEETNSLVSDSEKNDVRVNNEKLIEPNLGVVISNAIFQED-DTQLQNELDEEQREL 613

  Fly   583 ATGVK 587
            |.|:|
Yeast   614 ARGLK 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChTNP_650743.1 SLC5sbd_CHT 7..481 CDD:271368 118/530 (22%)
DUR3NP_011847.1 SLC5sbd_DUR3 14..517 CDD:271370 118/540 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.969724 Normalized mean entropy S2487
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.760

Return to query results.
Submit another query.