DRSC/TRiP Functional Genomics Resources

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Protein Alignment ChT and slc5a6b

DIOPT Version :9

Sequence 1:NP_650743.1 Gene:ChT / 42245 FlyBaseID:FBgn0038641 Length:614 Species:Drosophila melanogaster
Sequence 2:XP_005158632.1 Gene:slc5a6b / 796312 ZFINID:ZDB-GENE-050913-86 Length:603 Species:Danio rerio


Alignment Length:685 Identity:137/685 - (20%)
Similarity:253/685 - (36%) Gaps:172/685 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VVSIVLFYLLILV---VGIW----AGRKKQSGNDSEEEVMLAGRSIGLFVGIFTMTATWVGGGYI 64
            |:..|:|.||::.   :|::    .||:     .:.:|.::|.||:.......::.||:.....|
Zfish    11 VIDYVIFGLLLVASMSIGLYYAFTGGRQ-----STTQEFLIADRSMKCLPLSLSLMATFQSAVAI 70

  Fly    65 NGTAEAIYTSGLVWCQAPFGYALSLVFGGIFFANPMRKQGYITMLDPLQDSFGERMGGLLFLPA- 128
            .||...:|..|..:......|.|.|:.....|. |:..:.::|.:....:        |.|..| 
Zfish    71 IGTPAEVYAHGTQYWFIGCSYVLGLLIPAHIFI-PLFYRLHLTSVYQYLE--------LRFCKAV 126

  Fly   129 -LCGEVFWAAGILAALGA-------TLSVIIDMDHRTSVILSSCIAIFYTLFGGLYSVAYTDVIQ 185
             :||.|.:...::..:|.       .|:.:.......:|:.:..:...||..|||.:|.:|||.|
Zfish   127 RICGTVTFIFQMVIYMGVGIYTPALALNAVTGFHLWGAVLATGLVCTLYTALGGLKAVVWTDVFQ 191

  Fly   186 LFCIFIGLWMCI----------PFAWSNEHVG---SLSDLEVD-WIGHVEPKKHWLYIDYGLLLV 236
            ...:|.|....|          ..||.....|   |..||..| .:.|.    .|.....|:.|:
Zfish   192 TVVMFTGQLAVIIVGVHQAGGLSEAWGKVRDGGRISGIDLNPDPTVRHT----FWTLAVGGVFLM 252

  Fly   237 FG--GIPWQVYFQRVLSSKTAGRAQLLSYVAAAGCILMAIPPVLIGAIAKATPWNETDYKGPYPL 299
            ..  |:. |...||.|||:|...|.:..|:......|..:...|:|.:..|.....:..:..|..
Zfish   253 LSLYGVN-QAQVQRYLSSRTEREAVMSCYMVFPCLQLALLLSCLMGLVMFACYGQNSPVEQQYIT 316

  Fly   300 TVDETSMILPMVLQYLTPDFVSFFGLGAVSAAVMSSADSSVLSAASMFARNVYKLIFRQKASEME 364
            :.|:      |||.::.....:|.||..:..|.:.||..|.:|:|           |...|: :.
Zfish   317 SKDQ------MVLYFVMDMLQNFPGLPGLFVACLFSASLSTISSA-----------FNSLAT-VT 363

  Fly   365 IIWVMRVAIIVVGILATIMALTIPSIYGLWSMCSDLVYVILFPQLLMVVHFKKHCNTYGSLSAYI 429
            ::.:::....:....||:::..:...||:  :|..:.|         :||.         :::.:
Zfish   364 MVDLIKPHYSMTEARATLLSKLLALSYGI--ICLAMAY---------LVHL---------MNSSV 408

  Fly   430 VALAIRLSG--GEAILGLAPL-IKYPGYDEETKEQMFPFRTMAMLLSLVTLIS----VSWWTKMM 487
            :..|:.:.|  |..:|||..| |.:|               .|..:..||.:|    :::|..:.
Zfish   409 LQAALSIFGMIGGPLLGLFCLGIFFP---------------CANSIGAVTGLSAGLLMAFWVGIG 458

  Fly   488 FESGKLP-PSYDYFRCVVNIP---EDVQRVGDPSESGEQLSVMAGPLARSY------GAATM--- 539
            ....::| |........:.:|   |::.......|:..:.:.:.|..:.||      .:.|:   
Zfish   459 GFLTRMPSPVIPLLNSTITVPDVSENITAATAELEADSRSAGLHGFYSLSYMWYSALSSCTVLIV 523

  Fly   540 -----------AGKDERNGRINPALESDDDLPVAEARRINQETAQAQVK-----------KMLD- 581
                       .|.|..:|.:.|.:                :|||:.:|           |.:| 
Zfish   524 GLIISCITGPTKGDDVASGTVYPVV----------------KTAQSYLKPSTCCKTTAEHKQVDG 572

  Fly   582 ----NATGVKPSGGGGGHLQSQSGMAMPTAEQDNT 612
                |.| ||...|.    |.::...:|..|.:.:
Zfish   573 QKEMNGT-VKEDAGS----QEETQRFLPDVELETS 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChTNP_650743.1 SLC5sbd_CHT 7..481 CDD:271368 109/512 (21%)
slc5a6bXP_005158632.1 SLC5-6-like_sbd 9..532 CDD:294310 119/592 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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