DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ChT and Slc5a2

DIOPT Version :9

Sequence 1:NP_650743.1 Gene:ChT / 42245 FlyBaseID:FBgn0038641 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_072112.2 Gene:Slc5a2 / 64522 RGDID:620217 Length:670 Species:Rattus norvegicus


Alignment Length:540 Identity:132/540 - (24%)
Similarity:215/540 - (39%) Gaps:153/540 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NIAGVVSIVLFYLLILVVGIWAGRKKQSGNDSEEEVMLAGRSIGLFVGIFTMTATWVGGGYINGT 67
            |.|.::.|..::||::.||:|:..:...|  :.....|||||:..:....::.|:.:|.|:..|.
  Rat    20 NPADILVIAAYFLLVIGVGLWSMFRTNRG--TVGGYFLAGRSMVWWPVGASLFASNIGSGHFVGL 82

  Fly    68 AEAIYTSGLVWCQAPFGYALSLVFG----GIFFANPMRKQGYITMLDPLQDSFGERMGGL----- 123
            |.....|||    |..|:..:.:|.    |..|.......|.|||...|:..||.|...|     
  Rat    83 AGTGAASGL----AVAGFEWNALFVVLLLGWLFVPVYLTAGVITMPQYLRKRFGGRRIRLYLSVL 143

  Fly   124 -LFL--------PALCGEVFWAAGILAALGATLSVIIDMDHRTSVILSSCIAIFYTLFGGLYSVA 179
             |||        ....|.||    |..|||..:        ..|||....|.:.||:.|||.::.
  Rat   144 SLFLYIFTKISVDMFSGAVF----IQQALGWNI--------YASVIALLGITMIYTVTGGLAALM 196

  Fly   180 YTDVIQLFCIFIGLWMCIPFAWS---------NEHVGSLSDLEVD---WIGHV-----EPKKHWL 227
            |||.:|.|.|..|.::...:|:.         ::::|:::.|.|.   .:|::     :|:..  
  Rat   197 YTDTVQTFVILAGAFILTGYAFHEVGGYSGLFDKYLGAVTSLTVSKDPAVGNISSTCYQPRPD-- 259

  Fly   228 YIDYGLLL--VFGGIPW------------------QVYFQRVLSSKTAGRAQLLSYVAAAGCIL- 271
              .|.||.  |.|.:||                  ||..||.|:.|.      |::: .||||| 
  Rat   260 --SYHLLRDPVTGDLPWPALLLGLTIVSGWYWCSDQVIVQRCLAGKN------LTHI-KAGCILC 315

  Fly   272 --MAIPP----VLIGAIAKATPWNETDYKGPYPLTVDETSMILPMV-------------LQY--- 314
              :.:.|    |:.|.|::..          ||   ||.:.::|.|             :.|   
  Rat   316 GYLKLMPMFLMVMPGMISRIL----------YP---DEVACVVPEVCKRVCGTEVGCSNIAYPRL 367

  Fly   315 ---LTPDFVSFFGLGAVSAAVMSSADSSVLSAASMFARNVYKLIFRQKASEMEI-----IWVMRV 371
               |.|:.:....|..:.||:|||..|...|::::|..::|..: |.:|.:.|:     :||:.:
  Rat   368 VVKLMPNGLRGLMLAVMLAALMSSLASIFNSSSTLFTMDIYTRL-RPRAGDRELLLVGRLWVVFI 431

  Fly   372 AIIVVGILATIMALT-------IPSIYGLWSMCSDLVYVILFPQLLMVVHFKKHCNTYGSLSAYI 429
            ..:.|..|..:.|..       |.|:....:.....|:|:..        |....|..|:....|
  Rat   432 VAVSVAWLPVVQAAQGGQLFDYIQSVSSYLAPPVSAVFVLAL--------FVPRVNEKGAFWGLI 488

  Fly   430 VALAIRLSGGEAILGLAPLI 449
                     |..::|||.||
  Rat   489 ---------GGLLMGLARLI 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChTNP_650743.1 SLC5sbd_CHT 7..481 CDD:271368 130/536 (24%)
Slc5a2NP_072112.2 SLC5-6-like_sbd 22..670 CDD:382020 131/538 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340266
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.740

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