DRSC/TRiP Functional Genomics Resources

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Protein Alignment ChT and Slc5a4b

DIOPT Version :9

Sequence 1:NP_650743.1 Gene:ChT / 42245 FlyBaseID:FBgn0038641 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_075708.2 Gene:Slc5a4b / 64454 MGIID:1890478 Length:660 Species:Mus musculus


Alignment Length:700 Identity:158/700 - (22%)
Similarity:264/700 - (37%) Gaps:194/700 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NIAGVVSIVLFYLLILVVGIWAGRKKQSGNDSEEEVMLAGRSIGLFVGIFTMTATWVGGGYINGT 67
            |.|.:..||::::::|.||:|:  ..:|...:.....|||..:..:....::.|:.:|..:..|.
Mouse    25 NAADISVIVIYFIVVLAVGLWS--MVRSNRGTVGGFFLAGHDMAWWPMGASLFASNIGSNHFVGL 87

  Fly    68 AEAIYTSGLVWCQAPFGYALS-LVFGGIFFANPMR-KQGYITMLDPLQDSFGER-------MGGL 123
            |.....||:......:...|. ||.|.:|.  |:. |.|.:||.:.|:..||.:       :..|
Mouse    88 AGTGAASGIAIAAVEWNALLMVLVLGWVFL--PIYIKAGVLTMPEYLRKRFGGKRLQIYLSVLSL 150

  Fly   124 LFLPAL-------CGEVFWAAGILAALGATLSVIIDMDHRTSVILSSCIAIFYTLFGGLYSVAYT 181
            ..:.||       .|.:|    |..|||..|.:        :|.:...|..|||:.|||.||.||
Mouse   151 FIMVALQTSSIIFSGAIF----IQLALGLNLYL--------AVFILLAITAFYTVAGGLASVIYT 203

  Fly   182 DVIQLFCIFIGLWMCIPFAWSNEHVGSLSDLEVDWIGHV------------------EPKKHWLY 228
            |.:|.|.:.:|..:.:.||::  .||........::..:                  :|....::
Mouse   204 DSVQTFIMLLGSLILMGFAFA--EVGGYESFTEKYMNAIPSVVEGDNLTISPKCYTPQPDSFHVF 266

  Fly   229 IDYGLLLVFGGIPW------------------QVYFQRVLSSKTAGRAQLLSYVAAAGCIL---- 271
            .|    .|.|.|||                  ||..||.|..|.      :|:|.|| |||    
Mouse   267 RD----PVTGDIPWPGLIFGMTILAIWYWCADQVIVQRCLCGKN------MSHVKAA-CILCGYL 320

  Fly   272 ------MAIPPVLIGAIAKATPWNETDYKGPYPLTVDETSMILP--------------------M 310
                  :.:.|.:|..|                |..|:.:.::|                    :
Mouse   321 KLLPMFLMVMPGMISRI----------------LYTDKVACVVPSECEKQCGTAVGCTNYAYPTL 369

  Fly   311 VLQYLTPDFVSFFGLGAVSAAVMSSADSSVLSAASMFARNVYKLIFRQKASEMEIIWVMRVAIIV 375
            ||: |.||.:....|..:.|::|||..|...||:::|..::|..| |:||||.|::...|:..:|
Mouse   370 VLE-LMPDGLRGLMLSVMLASLMSSLTSIFNSASTLFTIDLYTKI-RKKASERELMIAGRIFGMV 432

  Fly   376 VGILATIMALTIPSIYGLWSMCSDLVYVI------LFPQL---LMVVHFKKHCNTYGSLSAYIVA 431
               |..:..|.:|.:.  .|....|.:.|      |.|.|   .|:..|.|..|..|:....:|.
Mouse   433 ---LIAVSILWVPLVQ--VSQNGQLFHYIGSVSSYLGPPLGAVFMLAIFFKRVNEQGAFWGLMVG 492

  Fly   432 LAIRLSGGEAILGLAPLIKYPGYDEETKEQMFP--------------FRTMAMLLSLVTLISVSW 482
            |         ::||..||....|.  |...:.|              |..:...:|::.::.||:
Mouse   493 L---------VVGLIRLIAEFVYG--TGSCVAPSNCPKIICGVHYMYFAIILFFVSIIVILGVSF 546

  Fly   483 WTKMMFESGKLPPSYDYFRC-------VVNIPEDVQRVGDPSESG----EQLSVMAGPLARSYGA 536
            .|:      .:|..:.|..|       ...|..|.:.:....|:|    |......|.|.|:  .
Mouse   547 LTE------PIPDVHLYRLCWSLWNNTEERIDLDAEELETQEEAGGALEEDSEQSRGCLKRA--C 603

  Fly   537 ATMAGKDERNGRINPALESDDDLPVAEARRINQETAQAQVKKMLDNATGV 586
            ..:.|..    ...|.|..:::   |..|:...:|::..:.:.:.|...|
Mouse   604 CLLCGLQ----NTGPKLTKEEE---AALRQKFSDTSEKPLWRTVMNINAV 646

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChTNP_650743.1 SLC5sbd_CHT 7..481 CDD:271368 134/578 (23%)
Slc5a4bNP_075708.2 SLC5-6-like_sbd 27..660 CDD:294310 156/697 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836610
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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