DRSC/TRiP Functional Genomics Resources

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Protein Alignment ChT and slc5a6a

DIOPT Version :9

Sequence 1:NP_650743.1 Gene:ChT / 42245 FlyBaseID:FBgn0038641 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_001020700.2 Gene:slc5a6a / 563356 ZFINID:ZDB-GENE-041001-177 Length:625 Species:Danio rerio


Alignment Length:639 Identity:136/639 - (21%)
Similarity:226/639 - (35%) Gaps:195/639 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VSIVLFYLLILV---VGIW----AGRKKQSGNDSEEEVMLAGRSIGLFVGIFTMTATWVGGGYIN 65
            |..|:|.:|::.   :|::    .||::     :.:|.:||.||:.......::.||:.....|.
Zfish    12 VDYVIFVVLLVASAGIGLYYAFSGGRQR-----TTQEFLLADRSMRCLPVSLSLLATFQSAVAIL 71

  Fly    66 GTAEAIYTSGLVWCQAPFGYALSL-----VFGGIF---------------FANPMRKQGYITMLD 110
            |....|||.|..:......|.|.|     :|..:|               |:..:|..|.:|.:.
Zfish    72 GAPSEIYTYGTQYWFLGCSYFLGLLIPAHIFIPVFYRLRLSSAYEYLELRFSKSVRICGTVTFIF 136

  Fly   111 PLQDSFGERMGGLLFLPALCGEVFWAAGILAALGATLSVIIDMDHRTSVILSSCIAIFYTLFGGL 175
            .:.    ..||.:|:.|||                .|:.:...|...:|:....:...||..|||
Zfish   137 QMV----IYMGVVLYAPAL----------------ALNAVTGFDLWGAVLAMGLVCTLYTALGGL 181

  Fly   176 YSVAYTDVIQLFCIFIGLWMCIPF----------AWSNEHVGS-LSDLEVDWIGHVEPKKHWLYI 229
            .:|.:|||.|...:|.|....|..          .|.....|| ::.|::    :.:|.:...:.
Zfish   182 KAVIWTDVFQTIVMFAGQLAVIVVGTHQAGGIAEVWRKAQNGSRIAGLDL----NPDPLERHTFW 242

  Fly   230 DYG-----LLLVFGGIPWQVYFQRVLSSKTAGRAQLLSY--------VAAAGCILMAIPPVLIGA 281
            ..|     |:|...|:. |...||.|||:|...|.:..|        |...||        |:|.
Zfish   243 TLGVGGVFLMLALYGVN-QAQVQRYLSSRTEKEAIMSCYAVFPCQQVVLTLGC--------LMGL 298

  Fly   282 IAKATPWNETDYKGPYPLTVDETSMILPMVLQYLTPDFVSFFGL-GAVSAAVMSSADSSVLSAAS 345
            :..|....|:.....|..|.|:  |:|.:|:..|.    ...|| |...|.:.|.|.|::.||.:
Zfish   299 VMYARYGEESPLDQGYVTTNDQ--MVLYLVMDVLR----DLPGLPGLFVACLFSGALSTISSAFN 357

  Fly   346 MFARNVYKLIFRQKASEMEIIWVMRVAIIVVGILATIMALTIPSIYGLWSMCSDLVYVILFPQLL 410
            ..|....:.:.:.....|            ....||:::..:...|||  :|..:.|:       
Zfish   358 SLATVTMEDLIKPHVPAM------------TEARATLLSKMLALAYGL--VCLAMAYI------- 401

  Fly   411 MVVHFKKHCNTYGSLSAYIVALAIRLSG--GEAILGLAPLIKYPGYDEETKEQMFPF-RTMAMLL 472
                        .||...::..|:.:.|  |..:|||..|           ...||: .:...|:
Zfish   402 ------------ASLMGSVLQAALSIFGMVGGPLLGLFCL-----------GMFFPWANSTGALV 443

  Fly   473 SLVTLISVSWW-------TKMMFESGKLPPSYDYFRCVVN---IPEDVQRVGD------------ 515
            .|.:.:.:::|       ::|...:  ||        |:|   ||:    ||:            
Zfish   444 GLASGLVMAFWIGIGSFVSRMSLSA--LP--------VINATIIPD----VGNMTTAVMTTLTTT 494

  Fly   516 -PSESGEQ---------------LSVMAGPLARSYGAATMAGKDERNGRINPAL 553
             |..||.|               .:|:...|..|:.......||...|.:.|.|
Zfish   495 KPRPSGVQALYSLSYMWYSAHNSATVVVVGLVVSFLTGPWKEKDLNPGTVYPVL 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChTNP_650743.1 SLC5sbd_CHT 7..481 CDD:271368 114/527 (22%)
slc5a6aNP_001020700.2 SLC5-6-like_sbd 9..532 CDD:294310 131/621 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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