DRSC/TRiP Functional Genomics Resources

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Protein Alignment ChT and Slc5a3

DIOPT Version :9

Sequence 1:NP_650743.1 Gene:ChT / 42245 FlyBaseID:FBgn0038641 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_059087.2 Gene:Slc5a3 / 53881 MGIID:1858226 Length:718 Species:Mus musculus


Alignment Length:721 Identity:154/721 - (21%)
Similarity:250/721 - (34%) Gaps:256/721 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MINIAGVVSIVLFYLLILVVGIWAGRKKQSGNDSEEEVMLAGRSIGLFVGIFTMTATWVGGGYIN 65
            ::..|.:..:.|:::|::.:|.:|..|  |...:.....|||||:           |||..|   
Mouse     4 VLEAADIAVVALYFILVMCIGFFAMWK--SNRSTVSGYFLAGRSM-----------TWVAIG--- 52

  Fly    66 GTAEAIYTS--------GLVWCQAPFGYA----------LSLVFGGIFFANPMRKQGYITMLDPL 112
               .:::.|        ||....|..|:|          |..:.|.:|....:| .|..||.:.|
Mouse    53 ---ASLFVSNIGSEHFIGLAGSGAASGFAVGAWEFNALLLLQLLGWVFIPIYIR-SGVYTMPEYL 113

  Fly   113 QDSF-GERMGGLLFLPALCGEVFWAA-GILAALGATLSV-----------IIDMDHRTSVILSSC 164
            ...| |.|:           :|::|| .:|..:...|||           .:..:...||||...
Mouse   114 SKRFGGHRI-----------QVYFAALSLLLYIFTKLSVDLYSGALFIQESLGWNLYVSVILLIG 167

  Fly   165 IAIFYTLFGGLYSVAYTDVIQLFCIFIG------------------------------------- 192
            :....|:.|||.:|.|||.:|...:.||                                     
Mouse   168 MTALLTVTGGLVAVIYTDTLQALLMIIGALTLMVISMVKIGGFEEVKRRYMLASPDVASILLKYN 232

  Fly   193 -----LWMCIPFAWSNEHVGSLSDLEVDWIGHV---EPKKHWLYIDYGLLLVFGGIPW---QVYF 246
                 ..|..|.|.:.:.:...:|.:|.|.|.:   .|...|.              |   ||..
Mouse   233 LSNTNACMVHPKANALKMLRDPTDEDVPWPGFILGQTPASVWY--------------WCADQVIV 283

  Fly   247 QRVLSSKTAGRAQLLSYVAAAGCILMA-----IPPVLI---GAIAKATPWNETDYKGPYPLTVDE 303
            ||||::|....|:        |..|||     :|..:|   |.|::.             :..||
Mouse   284 QRVLAAKNIAHAK--------GSTLMAGFLKLLPMFIIVVPGMISRI-------------VFADE 327

  Fly   304 TSMI-------------------LPMVLQYLTPDFVSFFGLGAVSAAVMSSADSSVLSAASMFAR 349
            .:.|                   .|.::..|.|..:....:..:.||:||..||...||:::|..
Mouse   328 IACINPEHCMQVCGSRAGCSNIAYPRLVMTLVPVGLRGLMMAVMIAALMSDLDSIFNSASTIFTL 392

  Fly   350 NVYKLIFRQKASEMEIIWVMRVAIIVVGILATIMALTIPSIYGLWSMCSDLVYVIL--------- 405
            :||||| |:.||..|::.|.|   |.|..:..|....:|.|.   .|....:|:.:         
Mouse   393 DVYKLI-RKSASSRELMIVGR---IFVAFMVVISIAWVPIIV---EMQGGQMYLYIQEVADYLTP 450

  Fly   406 -FPQLLMVVHFKKHCNT----YGSLSAYIVALAIRLSGGEAILGL---APLI----KYPGYDEET 458
             ...|.::..|.|.||.    ||.::.:::. |:||     ||..   ||..    ..||:.::.
Mouse   451 PVAALFLLAIFWKRCNEQGAFYGGMAGFVLG-AVRL-----ILAFTYRAPECDQPDNRPGFIKDI 509

  Fly   459 KEQMFPFRTMAMLLSLVTLI--------------SVSWWTKMMFESGKLPPSYD---------YF 500
             ..|:....:..:..|:|:|              :.::|:|....:.:.....|         ..
Mouse   510 -HYMYVATALFWITGLITVIVSLLTPPPTKDQIRTTTFWSKKTLVTKESCSQKDEPYKMQEKSIL 573

  Fly   501 RCVVNI--------------------PEDVQRVGDPSESGEQLSVMA-----GPL-ARSYGAATM 539
            :|..|.                    ||||..:....|.|..::.|.     .|: |.|.|.|.:
Mouse   574 QCSENSEVISHTIPNGKSEDSIKGLQPEDVNLLVTCREEGNPVASMGHSEAETPVDAYSNGQAAL 638

  Fly   540 AGKDER 545
            .|:.||
Mouse   639 MGERER 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChTNP_650743.1 SLC5sbd_CHT 7..481 CDD:271368 133/614 (22%)
Slc5a3NP_059087.2 SLC5sbd_SMIT 9..718 CDD:271382 153/716 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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