DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ChT and CG2187

DIOPT Version :9

Sequence 1:NP_650743.1 Gene:ChT / 42245 FlyBaseID:FBgn0038641 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_001189331.1 Gene:CG2187 / 43743 FlyBaseID:FBgn0017448 Length:623 Species:Drosophila melanogaster


Alignment Length:524 Identity:105/524 - (20%)
Similarity:198/524 - (37%) Gaps:143/524 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GVVSIVLFYLLI---LVVGIWAGRKKQSGNDSEEEVMLAGRSIGLFVGIFTMTATWVGGGYINGT 67
            |:....:|.:::   ..:|::.|...:|.| :.||.:..|:.:.......::.|:.:.|..|...
  Fly    25 GLTDYFVFVIMLGASAGIGVYFGFFSKSKN-TTEEYLRGGKKMQTLPIAISLVASQLSGIAIMSI 88

  Fly    68 AEAIYTSGLVWCQAPFGY------------ALSLVFGGIFFANPMRKQGYITMLDPLQDSFGERM 120
            ....||.|       |.|            .|..:...:|:.|.:.     ...:.|:..|.:|.
  Fly    89 PAESYTYG-------FNYIFVVLAMLVVIPILIYIIVPVFYENNVS-----NCYEYLEMRFNKRT 141

  Fly   121 GGL----------------LFLPALCGEVFWAAGILAALGATLSVIIDMD-HRTSVILSSCIAIF 168
            ..|                :|:|:|                ..:.:..|: |..:|::|| |.||
  Fly   142 RQLVTFFFVTNSFLMLPVYMFIPSL----------------AFAQVTGMNIHLINVMVSS-ICIF 189

  Fly   169 YTLFGGLYSVAYTDVIQLFCIFIGLWMCIPFAWSNEHVGSLSDLEVDWIGHVEPKKH---WLYID 230
            ||:.||:.:|.:|||:|      |..|.:    |...||.|..:....:..|..:..   ....|
  Fly   190 YTMLGGIKAVVWTDVVQ------GAIMLL----SVVAVGVLGTIRSGGMFTVMERASDGGRFNFD 244

  Fly   231 YGL----LLVF-----GGI-PW-------QVYFQRVLSSKTAGRAQLLSYVAAAGCILMAIPPVL 278
            :||    .:.|     ||| .|       |...||::|..:...|:....|:..|.::::....:
  Fly   245 FGLDPRIRMTFWGATMGGIFMWTGHIGLNQSCVQRIVSLPSYSHAKKSLIVSGLGFLIISFFNTI 309

  Fly   279 IGAIAKATPWNETDYKGPYPL---TVDETSMILPMVLQYLTPDFVSFFG--LGAVSAAVMSSADS 338
            .|.|..|.      |.|..|:   .|.:...::|..:|.:........|  :..|.:|.:||..:
  Fly   310 SGIIMFAR------YYGCDPMLAGLVSKPDKMMPFFVQDIMGHLAGMPGVFISCVFSAALSSLSA 368

  Fly   339 SVLSAASMFARNVYKLIFRQKASEMEIIWVMRVAIIVVG---------------ILATIMALT-- 386
            ::.|.|.:...:..|.  |.:.:|....|.|::.::|:|               ||.|::.:|  
  Fly   369 TLNSLAGVVYFDYIKP--RIRHTEARANWAMKLIVVVMGGYCILGGFMVQNFNSILQTVVTITGI 431

  Fly   387 -IPSIYGLWSMCSDLVYVILFPQLLMVVHFKKHCNTYGSLSAYI---VALAIRLSGGEAILGLAP 447
             ..::.|::                ::..|...||...::::.|   ||:...::.|:... .:.
  Fly   432 NTGAVVGVF----------------LLGMFVPRCNAKTAVTSIIVSVVAMVWIIANGQMNF-KSG 479

  Fly   448 LIKY 451
            ||||
  Fly   480 LIKY 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChTNP_650743.1 SLC5sbd_CHT 7..481 CDD:271368 104/523 (20%)
CG2187NP_001189331.1 SLC5sbd_NIS-SMVT 27..561 CDD:271383 104/522 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45448238
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.