DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ChT and CG6723

DIOPT Version :9

Sequence 1:NP_650743.1 Gene:ChT / 42245 FlyBaseID:FBgn0038641 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_650069.2 Gene:CG6723 / 41368 FlyBaseID:FBgn0037895 Length:587 Species:Drosophila melanogaster


Alignment Length:646 Identity:141/646 - (21%)
Similarity:234/646 - (36%) Gaps:160/646 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VSIVLFYLLILVVGIWAGRKKQSGNDSEEEVMLAGRSIGLFVGIFTMTATWVGGGYINGTAEAIY 72
            |:.|..:||.:.:||:.|...:|  .||::.||.||.:.:....|::.|::|.|..:.|....:|
  Fly    20 VAFVSMFLLCIGIGIYFGFMNKS--VSEDDYMLGGRKMLVIPIAFSLVASFVSGITLLGLPTEVY 82

  Fly    73 TSGLVWCQAPFGYALSLVFGGIFFANPMRKQGYITMLDPLQDSFGERMGGLLFLPALCGEVFWAA 137
            :.|:.:.....|.....|..|:|:..........:..:.|:..|..|:       .|.|.|.:|.
  Fly    83 SYGIQYLYVSCGVIGMGVVMGVFYLPVFHDLNITSTYEYLEVRFDRRL-------RLYGSVMFAI 140

  Fly   138 GILAALGATLSV-------IIDMDHRTSVILSSCIAIFYTLFGGLYSVAYTDVIQ------LFCI 189
            ..:|.|...:.|       :..:...|...:...|.:|||..|||.:|.:|||:|      ..|:
  Fly   141 MNVAYLPIVIYVPALAFNQVTGIGVHTITPIVCIICVFYTSLGGLKAVVWTDVVQAISMLGALCL 205

  Fly   190 FI--------GLWMCIPFAWSNEHVGSLSDLEVD-WIGHVEPKKHWLYIDYGLLLVFGGIPW--- 242
            ..        |..:.:..|||::.: ...||.:| .:.|.    .|       .|.||||.:   
  Fly   206 VAIKGTRDIGGAGVVLERAWSSDRL-EAPDLSIDPTVRHT----FW-------CLFFGGIVYWTQ 258

  Fly   243 -----QVYFQRVLSSKTAGRAQLLSYVAAAGCILMAIPPVLIGAIAKATPWNETDYKGPYPLT-- 300
                 |...||.||..:.|.|:....:...|.:::.......|.:..||      |:...|||  
  Fly   259 TNAVSQNMIQRYLSLPSLGDARKALCIFCVGVLILMALCGYNGLLIYAT------YQNCDPLTTK 317

  Fly   301 -VDETSMILPM-VLQYL--TPDFVSFFGLGAVSAAVMSSADSSVLSAASMFARNVYKLIFRQKAS 361
             ......:||: |::.|  .|.....|..|..||| :||..:.:.|.:::...:..|...::..|
  Fly   318 LAKARDQLLPLFVMKTLGELPGMTGLFIAGVFSAA-LSSLSTCLNSMSAVVLEDFVKPYVKKPLS 381

  Fly   362 EMEIIWVMRVAIIVVGILATIMALTIPSIYGLWSMCSDLVYVILFPQLLMVVHFKKHCNTYGSL- 425
            ...|.|:||:.::.||:|                 |..||||:.....::.:.......|.|.| 
  Fly   382 SSAINWIMRLVVVGVGVL-----------------CVCLVYVVEHMGTVLQLTMSLEAITNGPLF 429

  Fly   426 SAYIVALAIR-LSGGEAILG-------------------LAPLIKYPGYDEETKEQMFPFRTMAM 470
            ..:.:.|.:. ::|..|::|                   .:..|.|.......::..:.|.....
  Fly   430 GIFTIGLFLPWINGNSALVGGVMGVIAMSWVSLNAQWAIASGAITYKTKPLNVEQCDYSFNVTTS 494

  Fly   471 LLSLVTL------------ISVSWWTKM------------MFESGKLPPSYDYFRCVVNIPEDVQ 511
            |.:...|            ||..|:|..            .|..||            |.|..| 
  Fly   495 LANTTHLGASAEDIFPLYRISYMWYTTFGASITIFVALLGTFVFGK------------NNPNKV- 546

  Fly   512 RVGDPSESGEQLSVMAGPLARSYGAATMAGKDERNGRINPALESDDDLPVAEARRINQETA 572
               ||        |:..|..|.:.|   .|.::......|      |:|:....| |.|.|
  Fly   547 ---DP--------VLLTPCIRKFFA---FGSEKHMDAFRP------DIPLQHKLR-NDEVA 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChTNP_650743.1 SLC5sbd_CHT 7..481 CDD:271368 119/541 (22%)
CG6723NP_650069.2 SLC5sbd_NIS-SMVT 17..537 CDD:271383 121/561 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45448271
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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