DRSC/TRiP Functional Genomics Resources

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Protein Alignment ChT and slc5a8.1

DIOPT Version :9

Sequence 1:NP_650743.1 Gene:ChT / 42245 FlyBaseID:FBgn0038641 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_001351880.1 Gene:slc5a8.1 / 394505 XenbaseID:XB-GENE-479634 Length:620 Species:Xenopus tropicalis


Alignment Length:614 Identity:130/614 - (21%)
Similarity:235/614 - (38%) Gaps:138/614 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VLFYLLIL---VVGIW---AGRKKQSGNDSEEEVMLAGRSIGLFVGIFTMTATWVGGGYINGTAE 69
            |:|.|::|   |:||:   ||    .|..:.::.::.|||:.......::||:::....:.||..
 Frog    16 VVFALMLLISAVIGIYYAFAG----GGQKTSKDFLMGGRSMTAVPVALSLTASFMSAVTVLGTPA 76

  Fly    70 AIYTSGLVWCQAPFGYALSLVFGGIFFANPMRKQGYITMLDPLQ---DSFGERMGGLLFLPALCG 131
            .:|..|.::....|.||:.:|.....|.....:.|..:..:.|:   :.|...:|.:||   :..
 Frog    77 EVYRFGSMFSIFAFTYAIVVVISSEVFLPVFYRLGITSTYEYLELRFNKFVRLLGTILF---IIQ 138

  Fly   132 EVFWAAGILAALGATLSVIIDMDHRTSVILSSCIAIFYTLFGGLYSVAYTDVIQLFCIFIGLWMC 196
            .|.:...::.|....|:.:...|...:|:.:..:..||...|||.:|.:|||.|:..:..|....
 Frog   139 TVLYTGIVIYAPALALNQVTGFDLWGAVVATGVVCTFYCTMGGLKAVVWTDVFQVGIMVAGFSSV 203

  Fly   197 IPFAWSNEHVGSLSDLEVD---------WIGHVEP-KKHWLYIDYGLLLVFGGIPW-------QV 244
            |..|...:  |.:..:..|         |.....| ::|    .:..::|.|...|       |.
 Frog   204 IIRAVVVQ--GGIGPILNDSYYGDRLNFWDFTPNPLQRH----SFWTIVVGGTFTWTGIYGVNQS 262

  Fly   245 YFQRVLSSKTAGRAQLLSYVAAAGCILMAIPPVLIG----AIAK-ATPWNETDYKGPYPLTVDET 304
            ..||.::.||..:|:|..|:...|...:....||.|    :|.| ..||.......|        
 Frog   263 QVQRYIACKTRFQAKLSLYINLLGLWAILACAVLSGLAMYSIYKDCDPWTAQFVSAP-------- 319

  Fly   305 SMILPMVLQYLTPDFVSFFGLGAVSAA---VMSSADSSVLSAASMFARNVYKLIFRQKASEMEII 366
            ..::|.:...:..|:....|| .||.|   .:|:..||:.:.|::...::.|..|| ..||.::.
 Frog   320 DQLMPYLSLDILRDYPGLPGL-FVSCAYSGTLSTVSSSINALAAVTVEDLIKPYFR-SLSETKMS 382

  Fly   367 WVMRVAIIVVGILATIMALTIPSIYGLWSMCSDLVYV-------------------ILFPQLLMV 412
            |:.:...::.|.:...||       ||.|:...|:..                   |:||     
 Frog   383 WISKGTSLIYGAICIAMA-------GLASLMGGLLQAALSIFGMVGGPLLGLFALGIIFP----- 435

  Fly   413 VHFKKHCNTYGSLSAYIVALAIRLSGG--------EAILGLAPLIKYPGYDEETKEQMFPFRTMA 469
                 ..|:.|::...:...||.|..|        .|...|...:...|.:..:.|..:....|.
 Frog   436 -----FVNSLGAVIGLLSGFAISLWVGIGSQIYPPTASSSLPKPLSLEGCNFTSFESNWTTTVMP 495

  Fly   470 MLLSLVTLISV------SWWTKMMFESGKLPPSYDYFRCVVNIPEDVQRVGDPSESGEQLSVMAG 528
            |:.:|:..:|.      ||::.          ||.||                |..|..::|:.|
 Frog   496 MMTTLIPEVSSRPELADSWYSL----------SYLYF----------------STLGTIVAVVVG 534

  Fly   529 PLARSYGAATMAGKDERNGRINPALESDD 557
            .:     |:.::|..::|...:..|.|.|
 Frog   535 VI-----ASLLSGGLKQNVNRDFLLTSQD 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChTNP_650743.1 SLC5sbd_CHT 7..481 CDD:271368 114/536 (21%)
slc5a8.1NP_001351880.1 SLC5sbd_SMCT1 7..547 CDD:271402 126/601 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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