DRSC/TRiP Functional Genomics Resources

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Protein Alignment ChT and slc5a1

DIOPT Version :9

Sequence 1:NP_650743.1 Gene:ChT / 42245 FlyBaseID:FBgn0038641 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_956975.1 Gene:slc5a1 / 393654 ZFINID:ZDB-GENE-040426-1524 Length:658 Species:Danio rerio


Alignment Length:699 Identity:161/699 - (23%)
Similarity:267/699 - (38%) Gaps:194/699 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NIAGVVSIVLFYLLILVVGIWA----GRKKQSGNDSEEEVMLAGRSIGLFVGIFTMTATWVGGGY 63
            |.|.:..||:::|::|.||:||    .|....|      ..|||||:..:....::.|:.:|.|:
Zfish    25 NPADISVIVIYFLVVLAVGVWAMVRTNRATVGG------FFLAGRSMVWWPIGASLFASNIGSGH 83

  Fly    64 I-----NGTAEAIYTSGLVWCQAPFGYALSLVFGGIFFANPMRKQGYITMLDPLQDSF-GERMGG 122
            .     .|.|..|...|..|........|..:|..|:.     |.|.:||.:.|:..| |:|:..
Zfish    84 FVGIAGTGAAAGIAIGGFEWNALVVVIILGWLFVPIYI-----KAGVVTMPEYLKKRFGGQRIRI 143

  Fly   123 LLFLPALCGEVF-------WAAGIL--AALGATLSVIIDMDHRTSVILSSCIAIFYTLFGGLYSV 178
            .|.:.:||..||       :|..|.  .|||..:.:        :|::...|...||:.|||.:|
Zfish   144 YLSVLSLCLYVFTKISADMFAGAIFINQALGLNIYL--------AVVILLLITALYTVTGGLAAV 200

  Fly   179 AYTDVIQLFCIFIGLWMCIPFAWSNEHVGSLSDLEVDW-------IG---------------HV- 220
            .|||.:|...:.:|.::.:.||::.  ||...:....:       ||               |: 
Zfish   201 IYTDTLQTIIMVVGSFILMGFAFNK--VGGYENFRDSYMTAIPSVIGTNISESCYTPRADSFHIF 263

  Fly   221 -EP---KKHWLYIDYGLLLVFGGIPW-----QVYFQRVLSSKTAGRAQLLSYVAAAGCILMA--- 273
             :|   ...|..:.:||.:..|   |     ||..||.||:|.      ||:| .|||||..   
Zfish   264 RDPINGDLPWPGLLFGLTIQAG---WYWCTDQVIVQRCLSAKN------LSHV-KAGCILCGYLK 318

  Fly   274 -IPPVLI---GAIAKATPWNETDYKGPYPLTVDE-----------TSMILPMVLQYLTPDFVSFF 323
             :|..|:   |.|::....:|.....|     ||           |::..|.::..|.|:.:...
Zfish   319 LLPMFLMVFPGMISRVLYPDEIACVDP-----DECKAVCGAEVGCTNIAYPKLVVDLMPNGLRGL 378

  Fly   324 GLGAVSAAVMSSADSSVLSAASMFARNVYKLIFRQKASEMEIIWVMRV-AIIVVGI--------- 378
            .|..:.|::|||..|...||:::|..::|..| |.||.|.|::...|: .::::||         
Zfish   379 MLSVMLASLMSSLTSIFNSASTLFTMDIYTKI-RPKAKEKELMIAGRLFMLLLIGISIAWIPIVQ 442

  Fly   379 -------------LATIMALTIPSIYGLWSMCSDLVYVILFPQLLMVVHFKKHCNTYGSLSAYIV 430
                         :.:.:|..|.:::.|...|                   |..|..|:.....|
Zfish   443 TAQSGQLFDYIQSITSYLAPPIAAVFALAIFC-------------------KRVNEPGAFYGLCV 488

  Fly   431 ALAIRLSGGEAILGLAPLIKYPGYDEETKEQMFP--------------FRTMAMLLSLVTLISVS 481
            .|         ::|||.:|....|.  |...:.|              |..:...||.:.::|:|
Zfish   489 GL---------LVGLARMITEFAYG--TGSCVNPSNCPTIICGVHYLYFALILFGLSCILILSIS 542

  Fly   482 WWTKMMFESGKLPPSYDYFRCVV---NIPEDVQ-RVGDPSESGEQLSVMAGPLARSYGAATMA-- 540
            ..||      .:...:.|..|..   |..|.:. ...|.:|..:..|:....:....|....|  
Zfish   543 LMTK------PIEDKHLYRLCWSLRNNTEERIDLEADDWTEDQDSNSMETDEMREEPGCCKKAYN 601

  Fly   541 ---GKDERNGRINPALESDDDLPVAEARRINQETAQAQVKKMLDNATGV 586
               |.|:.|.   |.|..:.:   ||.:....:|.:..:.:.:.||..|
Zfish   602 WFCGFDQGNA---PKLTKEQE---AELKMKLTDTTEKPLWRNVVNANAV 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChTNP_650743.1 SLC5sbd_CHT 7..481 CDD:271368 136/579 (23%)
slc5a1NP_956975.1 SLC5sbd_SGLT1 27..658 CDD:271379 160/697 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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