DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ChT and CG5687

DIOPT Version :9

Sequence 1:NP_650743.1 Gene:ChT / 42245 FlyBaseID:FBgn0038641 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_001286910.1 Gene:CG5687 / 38255 FlyBaseID:FBgn0035293 Length:683 Species:Drosophila melanogaster


Alignment Length:585 Identity:123/585 - (21%)
Similarity:222/585 - (37%) Gaps:123/585 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 AGVVSIVLFYLLI--LVVGIWAGRKKQSGNDSEEEVMLAGRSIGLFVGIFTMTATWVGGGYINGT 67
            :|...::|..:|:  |.:||:.|..::.|:.|.|  .|.|..:.:|....::|.:::....:.|.
  Fly    97 SGYDYVILLGMLVISLGIGIFYGFFQKGGSSSNE--FLLGSEMSIFPVTLSLTTSFITAIELLGN 159

  Fly    68 AEAIYTSG--LVWCQAPFGYALSL---VFGGIFFANPMRKQGYITMLDPLQDSFGER---MGGLL 124
            ...:|..|  .|....|....:.:   :|..|:|     |....:..:.|...||:.   :|.:|
  Fly   160 PSEMYFQGTQFVLIVIPMVIVIPVAVKIFYPIYF-----KMELTSCYEYLGIRFGKEIRILGAVL 219

  Fly   125 FLPALCGEVFWAAGILAALGATLSVIIDMDHRTSVILSSCIAIFYTLFGGLYSVAYTDVIQLFCI 189
            ::..:|   |:.|..:.|....||....:|.:.:|:|...:.:||:..||:.:|...|..|...:
  Fly   220 YVIQMC---FYTAVAVLAPAIALSKATGLDTKIAVVLIYVVCVFYSSQGGMKAVVIADSFQAAVL 281

  Fly   190 FIGLWMCI------------PFAWSNEHVGSLSDLEVDWIGHVEP-KKHWLYIDYGLLLVFGG-I 240
            .:.|.:.:            .|..:::| ..|....:|    .:| .:|.::     .:|.|| .
  Fly   282 AVSLVLIVGLGCFYSGNPIQVFQTASDH-NRLEFFNMD----PDPTTRHTVW-----SVVIGGFF 336

  Fly   241 PW-------QVYFQRVLSSKTAGRAQLLSYVAAAGCILMAIPPVLIGAIAKATPWNETDYKGPYP 298
            .|       |...|:.:|.|:...|::....|..|.|::.:.....|.:.      .|.|....|
  Fly   337 YWTSLFCTNQASVQKCMSLKSLRLAKIALGFAIIGLIVVFLLNFYTGLMV------FTHYADCDP 395

  Fly   299 LT---VDETSMILPMVLQYLTPDFVSFFGLGAVSAAVMSSADSSVLSAASMFARNVYKLIFRQKA 360
            ||   :..|..:||   .|:...:                  ..:.|.|.:|...::.......|
  Fly   396 LTAGRISATDQLLP---YYVINTY------------------EHISSVAGIFVAGIFAASLGTVA 439

  Fly   361 SEMEIIWVMRVAIIVVGILATIMALTIP----SIYGLWSMCSDLVYVILFPQLLMVVHFKKHCNT 421
            |.:..:    .|:....:|...|.:.|.    :.|..|   ..|.:.|....|:.:|   :|.. 
  Fly   440 SALNSL----SAVTCEDLLVNGMNIKISPEKGATYAKW---MSLGFGIASFGLVFIV---EHLG- 493

  Fly   422 YGSLSAYIVALAIRLSG-------GEAILGLAPLIKYPGYDEETKEQMFPFRTMAMLLSLVTLIS 479
             |.|.|     .:.|:|       |..:||:|      .....||...:     ..||||..:|.
  Fly   494 -GVLQA-----TLTLNGLIGGVTLGLFVLGIA------CKQANTKGAFY-----GGLLSLALVIF 541

  Fly   480 VSWWTKMM-FESGKLPPSYDYFRCVVNIPEDV-QRVGDPSESGEQLSVMAGPLAR-SYGAATMAG 541
            |....::: .|...||.|.|...|.||:...: ..:.:|.|..|:....:.|:.| ||...:|.|
  Fly   542 VGVVAQIVSVEQPALPTSIDKCDCHVNMTNIIGSLLTEPLEVIEEGGFTSWPIFRLSYMWYSMIG 606

  Fly   542  541
              Fly   607  606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChTNP_650743.1 SLC5sbd_CHT 7..481 CDD:271368 104/518 (20%)
CG5687NP_001286910.1 SLC5sbd_NIS-SMVT 99..620 CDD:271383 122/583 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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