DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ChT and CG10444

DIOPT Version :9

Sequence 1:NP_650743.1 Gene:ChT / 42245 FlyBaseID:FBgn0038641 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_611465.2 Gene:CG10444 / 37294 FlyBaseID:FBgn0034494 Length:587 Species:Drosophila melanogaster


Alignment Length:487 Identity:110/487 - (22%)
Similarity:205/487 - (42%) Gaps:109/487 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VLFYLLIL--VVGIW----AGRKKQSGNDSEEEVMLAGRSIGLFVGIFTMTATWVGGGYINGTAE 69
            ||..:|::  ::||:    .|::|     :.:|.::|.:|:..|...|::.|:::....:.|.:.
  Fly    13 VLITILVISALIGIYYRYTGGKQK-----TTQEYLMADQSMTTFPVSFSLMASFMSAISLMGVSN 72

  Fly    70 AIYTSGLVWCQAPFGYALSLVFGGIFFANPMRKQGYITMLDPLQDSFGER--------------- 119
            ..|..|.::|.....|.||......||.....:....::.:.|:..||:.               
  Fly    73 ESYEFGTIFCVINIAYVLSTPIAAYFFLPVFYRMRTTSVYEYLERRFGQATRLSASLAFTVQMVL 137

  Fly   120 -MGGLLFLPALCGEVFWAAGILAALGATLSVIIDMDHRT-SVILSSCIAIFYTLFGGLYSVAYTD 182
             ||..|:.|||            ||.|...:     ||: ::::...:..||:..|||.:|..||
  Fly   138 YMGIALYAPAL------------ALEAVTGI-----HRSMAIVVIGLVCTFYSTLGGLKAVLITD 185

  Fly   183 VIQLFCIFIGLWMCIPFAWSNEHVGSLS---DLEVDWIGHVEPKKHWLYIDYGL---------LL 235
            |.|.|.:|..::..|  |.|....|..:   |:.|: .|.|.      :|::.|         .|
  Fly   186 VFQSFLMFAAIYAVI--AVSAIKAGGFAAIWDVAVE-RGRVN------FIEFSLDPTVRHTWWSL 241

  Fly   236 VFGGIPW--------QVYFQRVLSSKTAGRAQLLSYVAAAGCILMAIPPVLIGAIAKATPWNETD 292
            :.||:..        |...||:||.:....||        ..:...:|  ::|.::.:|.::...
  Fly   242 IIGGMVTYLSLYGVNQTQVQRLLSVRNLKSAQ--------SALWWNLP--ILGMLSFSTIFSGLS 296

  Fly   293 ----YKGPYPL---TVDETSMILPMVL-----QY--LTPDFVSFFGLGAVSAAVMSSADSSVLSA 343
                |:...||   .:|:...|:|:..     ||  |...|||  |:.:.|.:.:|||.:| |||
  Fly   297 IFYYYRDCDPLLKGRIDKRDQIMPLFALETMGQYPGLCGLFVS--GIFSASLSTISSAVTS-LSA 358

  Fly   344 ASM--FARNVYKLIFRQKASEMEIIWVMRVAIIVVGILATIMALTIPSIYGLWSMCSDLVYVILF 406
            .::  :.:.:||.||::...:.:.....::...:.|:|...:|....|:.|:......:..|:..
  Fly   359 VTLEDYLKPLYKAIFKRTLIDSKSTMPTKIVACIFGLLCIGLAFVAGSMGGVLQASLTIFGVVGG 423

  Fly   407 PQLLMVVHFKKHC----NTYGSLSAYIVALAI 434
            |  |:.:.....|    |..|.|..::|:|.:
  Fly   424 P--LLAIFTLGVCTTRSNQRGVLLGFLVSLIV 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChTNP_650743.1 SLC5sbd_CHT 7..481 CDD:271368 110/487 (23%)
CG10444NP_611465.2 SLC5sbd_NIS-SMVT 9..531 CDD:271383 110/487 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45448280
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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