DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ChT and Slc5a9

DIOPT Version :9

Sequence 1:NP_650743.1 Gene:ChT / 42245 FlyBaseID:FBgn0038641 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_001382057.1 Gene:Slc5a9 / 366441 RGDID:1311383 Length:688 Species:Rattus norvegicus


Alignment Length:601 Identity:139/601 - (23%)
Similarity:225/601 - (37%) Gaps:192/601 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VVSIVLFYLLILVVGIWAGRKKQSGNDSEEEVMLAGRSI----------------GLFVGIFTMT 55
            :|.:|::::.:|.||||:..:...|...  ...|||||:                |||:|:    
  Rat    37 IVVVVIYFVFVLAVGIWSSIRASRGTIG--GYFLAGRSMTWWPIGASLMSSNVGSGLFIGL---- 95

  Fly    56 ATWVGGGYINGTAEAIYTSGLVWCQAPFGYALSLVFGGIFFANPMRKQGYITMLDPLQDSF-GER 119
               .|.|...|.|    ..|..|.......||..:|..::.|     .|.:||...|:..| |:|
  Rat    96 ---AGTGAAGGLA----VGGFEWNATFLLLALGWIFVPVYIA-----AGVVTMPQYLKKRFGGQR 148

  Fly   120 MGGLLFLPALCGEVF---------WAAGILAALGATLSVIIDMDHRTSVILSSCIAIFYTLFGGL 175
            :...:.:.:|...:|         .|..|..|||..|       :.::|||....|: ||:.|||
  Rat   149 IQVYMSVLSLILYIFTKISTDIFSGALFIQMALGWNL-------YLSTVILLVVTAV-YTIAGGL 205

  Fly   176 YSVAYTDVIQLFCIFIGLWMCIPFAWSNEHVGSLSDLEVDWIGHVEPKKHWLYID---------- 230
            .:|.|||.:|. .|.:|..:.:.|         |...||.|.    |....||..          
  Rat   206 TAVIYTDALQT-VIMVGGALVLMF---------LGFREVGWY----PGLQQLYRQSIPNVTVPNT 256

  Fly   231 ---------YGLLL--VFGGIPW------------------QVYFQRVLSSKTAGRAQLLSYVAA 266
                     :.:|.  |.|.|||                  ||..||.||:|:...|:       
  Rat   257 TCHLPRSDAFHMLRDPVNGDIPWPGLIFGLTVLATWCWCTDQVIVQRSLSAKSLSHAK------- 314

  Fly   267 AGCIL---MAIPP----VLIGAIAKATPWNETDYKGPYPLTVDETSMI----------------- 307
            .|.:|   :.|.|    |:.|.|::|.          ||   ||.:.:                 
  Rat   315 GGSVLGGYLKILPMFFIVMPGMISRAL----------YP---DEVACVDPDICQRVCGARVGCSN 366

  Fly   308 --LPMVLQYLTPDFVSFFGLGAVSAAVMSSADSSVLSAASMFARNVYKLIFRQKASEMEIIWVMR 370
              .|.::..|.|..:....:..:.||:|||..|...|::::||.:|::.: |::|||.|::.|.|
  Rat   367 IAYPKLVMALMPVGLRGLMIAVIMAALMSSLTSIFNSSSTLFAIDVWQRV-RRQASEQELMVVGR 430

  Fly   371 VAIIVVGILATIMALTIPSIYG-----LWSMCSDLVYVILFP--QLLMVVHFKKHCNTYGSLSAY 428
            :.::   .|..|..|.||.|..     |:.....:...:..|  .|.::..|.|.....|:....
  Rat   431 LFVV---FLVLISILWIPIIQSSNSGQLFDYIQSITSYLAPPITALFLLAIFCKRVTEPGAFWGL 492

  Fly   429 IVALAIRLSGGEAILGLAPLIKY--PGYDEETKE----QMFPFRTMAMLLS-----LVTLIS--- 479
            :..|.:      .||.:.....|  |...|:.:.    :.|.:...|:||.     ::.:||   
  Rat   493 MFGLVV------GILRMILEFSYSAPACGEKDRRPAVLKDFHYLYFALLLCGLTAIIIVIISFFT 551

  Fly   480 ----------VSWWTK 485
                      ::|||:
  Rat   552 EPIPDEKLARLTWWTR 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChTNP_650743.1 SLC5sbd_CHT 7..481 CDD:271368 136/595 (23%)
Slc5a9NP_001382057.1 SLC5-6-like_sbd 48..688 CDD:382020 137/590 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340202
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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