DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ChT and CG31668

DIOPT Version :9

Sequence 1:NP_650743.1 Gene:ChT / 42245 FlyBaseID:FBgn0038641 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_001097055.2 Gene:CG31668 / 33395 FlyBaseID:FBgn0051668 Length:590 Species:Drosophila melanogaster


Alignment Length:644 Identity:126/644 - (19%)
Similarity:233/644 - (36%) Gaps:181/644 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GVVSIVLFY---LLILVVGIWAG--RKKQSG-------NDSEE------------EVMLAGRSIG 46
            |.|...:|.   :|.:.:|::.|  ||.::|       |::.|            :.|:..|::.
  Fly     7 GTVDYAVFLGVTILSIAIGLYFGFIRKSRNGPKTTTPTNEAPERRHQNFGSKKMNDYMMGSRNLR 71

  Fly    47 LFVGIFTMTATWVGGGYINGTAEAIYTSGLVWCQAPF-----GYALSLVFGGIF----------- 95
            :|....::.|:.:....|.||...||..|..:|....     |.|:|.::..:|           
  Fly    72 VFPVGMSLIASCISAVAIIGTPSEIYNYGTQYCFIVIALVLQGLAVSYIYLPVFSALQVTSSYEY 136

  Fly    96 ----FANPMRK-QGYITMLDPLQDSFGERMGGLLFLPALCGEVFWAAGILAALGATLSVIIDMDH 155
                |.:.:|. ...|.:||.           :|:||.|        ..|.||  .|:.:..|:.
  Fly   137 LEMRFHSAIRSIVSIIFILDV-----------VLYLPFL--------AYLPAL--ALNQVSGMNM 180

  Fly   156 RTSVILSSCIAIFYTLFGGLYSVAYTDVIQLFCIFIGLWMCIPFAWSNEHVGSLSDLEVDWI--- 217
            .........|.:.||:.|||.:|.:||:.|:..:|..:...:..|      ....|.:.|::   
  Fly   181 YLIEAFIIVICVIYTVLGGLKAVVHTDIWQVVIMFASVLTIVVLA------TCYIDDQADFLEGL 239

  Fly   218 --------GHVEPK---KHWLYIDYGLLLVFGG-IPW-------QVYFQRVLSSKT--AGRAQLL 261
                    ....|.   :|.::     .:|.|. ..|       |....|.:|..|  ..||.:.
  Fly   240 VRGGRLIFSETNPSPFARHTVW-----SVVIGNTFYWTSLNAVHQTVVHRYMSLPTLKMARASIA 299

  Fly   262 SYVAAAGCILMAIPPVLIGAIAKATPWNETDYKGPYPLTVDETSMILPMVLQYLTPDFV-----S 321
            ..|..|...:..:  ..:|.:....      |:...||:..     |.|....|.|.||     .
  Fly   300 FLVVGAAFFISLL--CYLGLLIFHA------YRDCDPLSAG-----LIMNDDQLVPLFVVNSLGH 351

  Fly   322 FFG-----LGAVSAAVMSSADSSVLSAASMFARNVYKLIFRQKASEMEIIWVMRVAIIVVGILAT 381
            .:|     :..:..|.:||....:.|.:.:..:::.:..|:.:..|.....|::.:|:|:|:||.
  Fly   352 VYGMPGLFIAGIFGASLSSLSVYLNSTSLVILQDLVRGCFKMELGEWASTIVVKGSIVVLGLLAF 416

  Fly   382 IMALTIPSIYGLWSMCSDLVYVI------LFPQLLMVVHFKKHCNTYGSLSAYIVALAIR--LSG 438
            .|...:..:.|:.|:...|..:.      :|...::|    ...||.|:....|.::.:.  :|.
  Fly   417 AMVFVLEKVSGVLSISVSLAAIAASSTFGIFTVGMLV----PWANTVGTAVGGIASVLLTGWISF 477

  Fly   439 G-------------------EAILGLAPLIKYPGYDEETKEQMFP-FR------------TMAML 471
            |                   |..|..|.:.:.....|   |::|| :|            |:.::
  Fly   478 GSQFAAASGQLGSQRLPVSVEGCLANASVAENAWVAE---EEVFPLYRLSYHWISPIGVLTVVVV 539

  Fly   472 LSLVTLISVSWWTKMMFESGKLPPSYDYFRCVVNIPEDVQRVGDPSESGEQLSVMAGPL 530
            .|||:|::.....|.: :|..:.|....|     :|::....|:..|:    ||...||
  Fly   540 GSLVSLVTKPTDIKSL-DSDLITPVIHRF-----LPKECFEQGNAEEN----SVKDNPL 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChTNP_650743.1 SLC5sbd_CHT 7..481 CDD:271368 114/592 (19%)
CG31668NP_001097055.2 SLC5sbd_NIS-SMVT 9..531 CDD:271383 109/573 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45448260
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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