DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ChT and Slc5a6

DIOPT Version :9

Sequence 1:NP_650743.1 Gene:ChT / 42245 FlyBaseID:FBgn0038641 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_001171092.1 Gene:Slc5a6 / 330064 MGIID:2660847 Length:634 Species:Mus musculus


Alignment Length:530 Identity:112/530 - (21%)
Similarity:200/530 - (37%) Gaps:129/530 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 INIAGVVSIVLFYLLI---LVVGI------WAGRKKQSGNDSEEEVMLAGRSIGLFVGIFTMTAT 57
            |:...||..|:|.||:   ||:|:      |       |:.:..|:::|.|.:|......::.||
Mouse    20 ISTFSVVDYVVFGLLLVLSLVIGLYHACRGW-------GHHTVGELLMADRKMGCLPVALSLLAT 77

  Fly    58 WVGGGYINGTAEAIYTSGLVWCQAPFGYALSLVFGGIFFANPMRKQGYITMLDPLQDSFGERMGG 122
            :.....|.|....|:..|..:......|.|.|:.....|.....:....:..:.|:..|.:.:  
Mouse    78 FQSAVAILGAPAEIFRFGTQYWFLGCSYFLGLLIPAHIFIPVFYRLHLTSAYEYLELRFNKAV-- 140

  Fly   123 LLFLPALCGEVFWAAGILAALGA-------TLSVIIDMDHRTSVILSSCIAIFYTLFGGLYSVAY 180
                 .:||.|.:...::..:|.       .|:.:...|...||:....:...||..|||.:|.:
Mouse   141 -----RICGTVTFIFQMVIYMGVALYAPSLALNAVTGFDLWLSVLALGIVCNIYTALGGLKAVIW 200

  Fly   181 TDVIQLFCIFIGLWMCI----------PFAW--SNEHVGSLSDLEVD---WIGHVEPKKHWLYID 230
            |||.|...:|:|..:.|          ...|  :::| |.:|.:.:|   ::.|.    .|    
Mouse   201 TDVFQTLVMFLGQLVVIIVGAARVGGLGHVWNVTSQH-GLISGINLDPDPFVRHT----FW---- 256

  Fly   231 YGLLLVFGGIPW--------QVYFQRVLSSKTAGRAQLLSYVAAAGCILMAI-PPVLIGAIAKAT 286
               .|.|||:..        |...||.|||.:. ||.:||..|...|..:|: ...|||.:..| 
Mouse   257 ---TLAFGGVFMMLSLYGVNQAQVQRYLSSHSE-RAAVLSCYAVFPCQQVALCMSCLIGLVMFA- 316

  Fly   287 PWNETDYKGPYPLTVDETSMILPMVLQYLTPDFVSFF-GLGAVSAAVMSSADSSVLSAASMFARN 350
                  |...|.::.:........::.|...|.:... ||..:..|.:.|...|.:|:|      
Mouse   317 ------YYNMYSMSPELKQAAPDQLVLYFVMDLLKDMPGLPGLFVACLFSGSLSTISSA------ 369

  Fly   351 VYKLIFRQKAS-EMEII---WVMRVAIIVVGILATIMALTIPSIYGLWSMCSDLVYVILFPQLLM 411
                 |...|: .||.:   |..:    :....|.:::..:...|||  :|..:.|:        
Mouse   370 -----FNSLATVTMEDLIQPWFPQ----LTETRAIMLSRGLAFAYGL--VCLGMAYI-------- 415

  Fly   412 VVHFKKHCNTYGSLSAYIVALAIRLSG--GEAILGLAPLIKYPGYDEETKEQMFP-FRTMAMLLS 473
                ..|..:       ::..|:.:.|  |..:|||..|..:           || ...:..::.
Mouse   416 ----SSHLGS-------VLQAALSIFGMVGGPLLGLFCLGLF-----------FPCANPLGAIVG 458

  Fly   474 LVTLISVSWW 483
            |:|.:::::|
Mouse   459 LLTGLTMAFW 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChTNP_650743.1 SLC5sbd_CHT 7..481 CDD:271368 110/521 (21%)
Slc5a6NP_001171092.1 SLC5-6-like_sbd 23..548 CDD:320982 111/527 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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