DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ChT and CG32669

DIOPT Version :9

Sequence 1:NP_650743.1 Gene:ChT / 42245 FlyBaseID:FBgn0038641 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_727460.1 Gene:CG32669 / 326229 FlyBaseID:FBgn0052669 Length:604 Species:Drosophila melanogaster


Alignment Length:487 Identity:103/487 - (21%)
Similarity:186/487 - (38%) Gaps:107/487 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VVSIVLFYLLILVVGIW---AGRKKQSGNDSEEEVMLAGRSIGLFVGIFTMTATWVGGGYINGTA 68
            ::::||  ::.:.:||:   .|.|:    .:..|.:||.||:.:....|::.|:::....|.|.:
  Fly    11 ILAVVL--IISVAIGIYYRFVGGKQ----STTTEYLLADRSMNVAPVAFSLMASFMSAVTILGVS 69

  Fly    69 EAIYTSGLVWCQAPFGYALSL---------VFGGIFFANPMR----KQGYITMLDPLQDSFGER- 119
            ...|..|.::......|.||.         ||..:..|:...    :.||.|.| ....||..: 
  Fly    70 MENYQYGTMFVVINLSYVLSTPVAAYLIIPVFYRLKTASVYEYLELRFGYATRL-AASLSFSLQM 133

  Fly   120 ---MGGLLFLPALCGEVFWAAGILAALGATLSVIIDMDHRTSVILSSCIAIFYTLFGGLYSVAYT 181
               ||.:::.|||                .|..:..:....|:::...:..||...||:.:|..|
  Fly   134 VLYMGIVVYAPAL----------------ALEAVTGLSQVFSIVIVGVVCTFYATLGGMKAVLIT 182

  Fly   182 DVIQLFCIFIGLWMCIPFAWSNEHVGSLSDLEVDW--------IG----HVEP-KKH-WLYIDYG 232
            |:.|...:|..::..|..||..  .||   |||.|        |.    .|:| ::| |.....|
  Fly   183 DIYQSLLMFAAVFSVIICAWVK--AGS---LEVIWRVAQENGRINLTNFSVDPTERHTWFTQILG 242

  Fly   233 ----LLLVFGGIPWQVYFQRVLSSKTAGRAQL-----------LSYVAAAGCILMAIPPVLIGAI 282
                .|.::|....||.....:.|.:|.||.|           ||...:..||.           
  Fly   243 GCATYLAIYGVNQTQVQRLMAVKSLSAARAALWWCLPILCLLSLSTCFSGLCIY----------- 296

  Fly   283 AKATPWNETDYKGPYPL---TVDETSMILPMVLQYLTPDFVSFFGL--GAVSAAVMSSADSSVLS 342
                 |.   |:...||   .|:....::|:.:.....::....||  ..:..|.:|:..|.:.|
  Fly   297 -----WY---YRDCDPLLEGRVNSRDQVMPLFVVDTMGEYTGLAGLFVSGIFCASLSTISSIISS 353

  Fly   343 AASMFARNVYKLIF----RQKASEMEIIWVMRVAIIVVGILATIMALTIPSIYGLWSMCSDLVYV 403
            .|::...:..|.:.    ::..::.:.:|..::..:..|.|...||....||.||......:..:
  Fly   354 LAAVTLEDYLKPLVSCCAKRTLTDRQTLWYSKLLSLFFGALCIGMAFMAGSIGGLLQAALSIFGI 418

  Fly   404 ILFP--QLLMVVHFKKHCNTYGSLSAYIVALA 433
            |..|  .|..:..:....|..|::...:::||
  Fly   419 IGGPLLGLFTLGMYVTKANEKGAIGGLLISLA 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChTNP_650743.1 SLC5sbd_CHT 7..481 CDD:271368 103/487 (21%)
CG32669NP_727460.1 SLC5sbd_NIS-SMVT 7..527 CDD:271383 103/487 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45448281
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.