DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ChT and CG33124

DIOPT Version :9

Sequence 1:NP_650743.1 Gene:ChT / 42245 FlyBaseID:FBgn0038641 Length:614 Species:Drosophila melanogaster
Sequence 2:NP_001097056.3 Gene:CG33124 / 318891 FlyBaseID:FBgn0053124 Length:588 Species:Drosophila melanogaster


Alignment Length:625 Identity:128/625 - (20%)
Similarity:243/625 - (38%) Gaps:161/625 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GVVSIVLFY---LLILVVGIWAGRKKQS-------------------GNDSEEEVMLAGRSIGLF 48
            |.|...:|.   :|.:.:|::.|..|::                   |:....|.::....:.:|
  Fly     7 GTVDYTVFLGVTILSIAIGLYFGWIKKTKKEMESSPADTPEISIPNFGSKKMNEYLMGSGHLKVF 71

  Fly    49 VGIFTMTATWVGGGYINGTAEAIYTSG-----LVWCQAPFGYALSLVFGGIFFANPMRKQ-GYIT 107
            ....::.|:::.|..|.|....||..|     :|......|.|:|.::..:|.|..:|.. .|:.
  Fly    72 PVAMSLIASFISGVAILGNPSEIYYYGTQYSLIVLAIVIQGLAVSYIYLPVFSALQVRSSYEYLG 136

  Fly   108 M-LDPLQDSFGERM---------GGLLFLPALCGEVFWAAGILAALGATLSVIIDMDHRTSVILS 162
            | ..||..:....|         ..::|:|||        .:..|.|..:.:|        .:|.
  Fly   137 MRFHPLIRNIVSIMFVIEVLLYTPFVVFVPAL--------ALNQASGLNIHMI--------EVLI 185

  Fly   163 SCIAIFYTLFGGLYSVAYTDVIQLFCIFIGLWMCIPFAWSNEHVGSLSDLEVDWIGHVEPKKHWL 227
            ..:.:.|||.|||.:|.:||:.|:..:|..:.:....|     ...::||: |:...:       
  Fly   186 IVVCVIYTLLGGLKAVVHTDIWQVVIMFASVVVVAILA-----TCYITDLD-DFFESL------- 237

  Fly   228 YIDYGLLLVFGGIPWQVYFQRVLSSKTAGRAQLLSYVAAAGCIL----MAIPPV----------L 278
             :|.| .|:||.|....|.:..:.|...|.|...:.:.|....:    |::|.:          :
  Fly   238 -VDGG-RLIFGNINPSPYVRNTVWSVVIGGAFYWTSITAVHQTMVHRYMSLPNLKMARTSIAFFV 300

  Fly   279 IGAIAKATPWNETD------YKGPYPLTVDE---TSMILPM-VLQ-----YLTPD-FVS-FFGLG 326
            :|:|...:..:...      ||...||:..:   ...::|: |:|     |..|. |:: .||.|
  Fly   301 LGSIIFYSVLSFLGLLIFNMYKDCDPLSAGQIMNNDQLVPLFVVQSVGHIYGIPGLFIAGIFGAG 365

  Fly   327 AVSAAVMSSADSSVLSAASMFARNVYKLIFRQKASEMEIIWVMRVAIIVVGILATIMALTIPSIY 391
            ..|.:|..::.|.|:      .:::.:..|:.:..|.....:::..|:::|.|.....|.:..:.
  Fly   366 LSSLSVFLNSTSLVI------LQDIVRGCFKMQPGETASAIIVKATIVIMGALVFGEVLLLEKVS 424

  Fly   392 GLWSMCSDLVYVI------LFPQLLMVVHFKKHCNTYGSLSAYIVALAIR--LSGGEAILGLAPL 448
            |:.|:|..||.:.      :|...::|    ...||.|:....|....:.  ::.|..|...:..
  Fly   425 GILSICMSLVAIATSSTFGIFTLAVLV----PWANTVGTAVGGIAGFLLTGWITFGSQIAAASGQ 485

  Fly   449 IKY----------PG---------YDEETKEQMFP-FR------------TMAMLLSLVTLISVS 481
            :.:          ||         .||   ||:|| ||            |:.::.|||:|::..
  Fly   486 LHHHRLPVSVASCPGNVTARENVWVDE---EQVFPLFRLSFHWINPIGALTVVVVGSLVSLVTKP 547

  Fly   482 WWTKMMFESGKLPPSYDYFRCVVNIPEDV--QRVGDPSES 519
            ...|.: :|..:.|....|     :|::.  ||..|.||:
  Fly   548 TDIKSL-DSDLISPVIHRF-----LPKECFKQRNLDKSEA 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ChTNP_650743.1 SLC5sbd_CHT 7..481 CDD:271368 117/582 (20%)
CG33124NP_001097056.3 SLC5sbd_NIS-SMVT 9..533 CDD:271383 112/567 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45448259
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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